| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1749 |
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| Symbol | |
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| ID | 5297562 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | - |
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| Start bp | 1739220 |
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| End bp | 1740413 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 640770021 |
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| Product | type II secretion system protein |
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| Protein accession | YP_001306973 |
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| Protein GI | 150021619 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.28453 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAATTTG AGTATCAAGC TTACAATAAG GATATGCAAA AGGTAAAAGG TGAAATTGAA
GCAGCGAATT TACAAGAAGC TTTATCAAAA TTGAAGTTAA ACGGATTATC CGTTGTTGAT
ATTAGGGAAG CAAAGATAAG GAAGGAATTT AAAAATATTT TTGGTATTCC ATTAAAAGAT
ATAGTATTTT TTACAAGACA ACTTGAGACT ATGATAAAAG CAGGTTTAAG ATTACGAGAG
GCAATACATA TTTTGTCAAA CCAAGAAATA TTTTCAAAGA GATTTAGAAA AGTTTTGCTA
AATGTTGTTA ATGAATTGGA TGTTGGAACA TCCCTGACAG ATGCTTTTAA AAAGCAAGGA
GTGTTTGATA ACGTTTTTAT TAATATGTTG AAAGCGGGAG AGGAAGGCGG AGTTTTGGAA
GAAACTTTAG AAAAATTATC TAATTATTAT GAAAATTTGA ATAGAACGCA ACAACAAGTA
AAATCTGCAA TGGTATACCC AATTTTTATT CTCAGTTTCG CAGTTATTGT TGTTTTGGTA
ATTAGTTTAT TTATTTTACC AAAACTTTTT ATGGTATTTG GAAATATTCC AACATCTGGA
TTGATTTCTA CTCTTGTAAG GCTTAATAAG TTGTTAACGG AAAATGGTTT TTTAGTTGCT
GTATTTTCTA TTTTGTTGTT TTCCGGGATT TTTCTGTTTT TGAAAACAGA ATATGGAAAA
AAATTAAAAG ATTTTGTTGG AAATCTATTT CCACCTATTA GAAAATTGAG AGAAAAAATA
ACGTTTGAAA GATTTTCAAG AACTTTTGGG GTACTTGTTG GGAGTGGTGT TTCGATTATT
GATTCCTTGG AAATGGCGGC AAGAGCTTCT AATAATAGAA AATTTATTTC AAAAATAAAA
AATGTAGAAG AAAAGGTTAA AAGTGGAAAT TCTCTGAAAC AGGCTTTAAA ATCTGAAAAG
GTTTTTCCAC AAATAATTTA TGAAATGATA GGTACAGGTG AAGAGACGGG TAAATTGGAA
GTGGTAATGG AAAAAGTGGC GGATTTTTTT GATGATCAGA TACAACAAGA TACGAAAAAA
TTATTATCAA TGCTTGAGCC AGTGATGATA GCTTTTGTTG GGCTTTTTAT TGCATTTTTG
GCATATGCTA TGTATTCAAC TATTTTCCAA ATGCAATCAA CTTTTGGAGG ATAA
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| Protein sequence | MKFEYQAYNK DMQKVKGEIE AANLQEALSK LKLNGLSVVD IREAKIRKEF KNIFGIPLKD
IVFFTRQLET MIKAGLRLRE AIHILSNQEI FSKRFRKVLL NVVNELDVGT SLTDAFKKQG
VFDNVFINML KAGEEGGVLE ETLEKLSNYY ENLNRTQQQV KSAMVYPIFI LSFAVIVVLV
ISLFILPKLF MVFGNIPTSG LISTLVRLNK LLTENGFLVA VFSILLFSGI FLFLKTEYGK
KLKDFVGNLF PPIRKLREKI TFERFSRTFG VLVGSGVSII DSLEMAARAS NNRKFISKIK
NVEEKVKSGN SLKQALKSEK VFPQIIYEMI GTGEETGKLE VVMEKVADFF DDQIQQDTKK
LLSMLEPVMI AFVGLFIAFL AYAMYSTIFQ MQSTFGG
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