| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1736 |
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| Symbol | uvrC |
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| ID | 5297078 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | - |
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| Start bp | 1725799 |
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| End bp | 1727451 |
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| Gene Length | 1653 bp |
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| Protein Length | 550 aa |
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| Translation table | 11 |
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| GC content | 27% |
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| IMG OID | 640770008 |
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| Product | excinuclease ABC subunit C |
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| Protein accession | YP_001306960 |
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| Protein GI | 150021606 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0322] Nuclease subunit of the excinuclease complex |
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| TIGRFAM ID | [TIGR00194] excinuclease ABC, C subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00115993 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGATAGATA GAGAAATATT AAAAAATATT CCTGAGAAAC CTGGTGTATA TATTTTTAAA
AGGGATAAAG AATATGTTTA TATTGGAAAG TCGAAAAATT TAAAAAAGCG ACTTAATTCT
CATTTTTCTT TTAAAGAAGA AAAAAGTCGG CTTATAGTTG AAGAATCAAA TAAATTAGAG
ACTATAATAG TAAAAAATGA GAAAGAATCA TTGCTTTTAG AAGCAACATT AATTTACAAA
TATAAACCAA AGTATAATGT TATGCTAAAA GAAAGTGAAC CGTATCCATA CATAAGAATT
TCATCTGATG TTTTTCCTTA TGTTGAAGTA ACTAGAAATA GAGATAAAGA TGGTAAATAT
TTCGGGCCGT ATACAAATGT AAAATTTACA AGGTTGTTTT TAGAAGTCTT GCAAAAGATT
TTGAATTTTA GAACGTGTAA AAAAAATATT GAGAAAATAA AAAAGCCATG TTTGAATTAT
TACTTAAAAA CGTGTGTAGC GCCGTGTGTA GATGAAAACA AAAATTTTAA AATGTATGGT
GAGATAATTA AACGTTTGGA AGAGGTTTTA AGTGGTGATT ATGAATATAT TAGGAATTTT
ATTGAAGCAA AAATGTACCA TCATGCGAAA ATGCTAGATT TTGAGAATGC AGCAAAATAT
AGAGATGTGT TACTAGCATT TAATAATATT ATGATAAATC AGGGGATTGT TTTAAGGGAT
AAAAGAAATG TGGACTACAT TGTTTTTAAA GATAACATGT TTTTAGTCTT AAAGGTTAGA
AGTGGTGTGT TAACTTCAAA ACTTCTTTAT GAAGCTTCAT TAACTTTTGA AGAATTTATA
TATCAGTTTT ATTATGGTAT GAAAAGTGAT TTGCCAAATA AAATAGTTGT CTCAAAACAA
ATTAATTTGA ATTTTGATGT TCCAATAATT GTGTGTAGAG AGGAAGACGA TAAATATCTT
TTAGAAATAG CTTTAGAGAA TTTAACTGAG CATATTAAAT CAATTAATTT TAGTAAAGAT
ATTTTAATTA AGATGAAAGA GATTTTAAAT TTAAAAAAAA TTCCATTTAG GATTGAGGGG
ACAGATATTT CACATAGAAA TGGTAGATTT ACAGTTGCTT CACTGATTGT TTTTGAAAAT
GGATATCCAA AAAAAGATGA ATATAGAAGA TATAAGCTTG GGGACATTTT AGATGATTTT
GAAAGTATTA GAATTTTTAT TAGAAAAAGA TATACAAAAC ACCGACCACC AGATTTATTT
TTTGTGGATG GTGGTAAGGG ACAAGTTAAT GCAGCAATTG GCGAATTTAA TAAAATGAAT
ATTGATATAG ATGTTGTTGG AATTGCAAAG GAGGAAGAAG TAATAGTTAC TAAAAATAAG
AGCTTTAAAC TTGATCCAAC TGATGTTGTG TTAAGAACTT TAATTTTTGT AAGAGATGAA
ACTCATAGAG TTGCAAATTC TTTTAGTGGA AAGTTAAAAA ATAATGAGTA TAAAGTTAGT
AAATTGGATA GTATTAAAGG AATTGGGCCA AAAAGAAAAA AACAGTTACT TATGAAATTT
GGAACACTCA AAAACATTAA AAGTGCATCA TTAGAGGAAC TTGAAGAAAT TGTAGGAAAA
ACAATAGCGT TAAGAATTAA GGAAGAATTG TGA
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| Protein sequence | MIDREILKNI PEKPGVYIFK RDKEYVYIGK SKNLKKRLNS HFSFKEEKSR LIVEESNKLE
TIIVKNEKES LLLEATLIYK YKPKYNVMLK ESEPYPYIRI SSDVFPYVEV TRNRDKDGKY
FGPYTNVKFT RLFLEVLQKI LNFRTCKKNI EKIKKPCLNY YLKTCVAPCV DENKNFKMYG
EIIKRLEEVL SGDYEYIRNF IEAKMYHHAK MLDFENAAKY RDVLLAFNNI MINQGIVLRD
KRNVDYIVFK DNMFLVLKVR SGVLTSKLLY EASLTFEEFI YQFYYGMKSD LPNKIVVSKQ
INLNFDVPII VCREEDDKYL LEIALENLTE HIKSINFSKD ILIKMKEILN LKKIPFRIEG
TDISHRNGRF TVASLIVFEN GYPKKDEYRR YKLGDILDDF ESIRIFIRKR YTKHRPPDLF
FVDGGKGQVN AAIGEFNKMN IDIDVVGIAK EEEVIVTKNK SFKLDPTDVV LRTLIFVRDE
THRVANSFSG KLKNNEYKVS KLDSIKGIGP KRKKQLLMKF GTLKNIKSAS LEELEEIVGK
TIALRIKEEL
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