| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1672 |
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| Symbol | |
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| ID | 5298279 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | + |
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| Start bp | 1660453 |
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| End bp | 1661262 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 640769948 |
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| Product | CRISPR-associated RAMP Csm3 family protein |
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| Protein accession | YP_001306900 |
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| Protein GI | 150021546 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1337] Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) |
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| TIGRFAM ID | [TIGR02582] CRISPR-associated RAMP protein, Csm3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.899552 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGTTAATT TAGAATTTAA AGGAAAAATA ATTGTTAAAG CTGATATACA TGTTGTTACT
GGGCTTCAAA TTGGCAAAGA AAATTCAATG GAAATTGGGG GTATTGATAA TCCAGTTATT
AAGGATAGTT TAGGAAAACC TTATATACCT GGTTCATCTT TAAAAGGGAA ACTAAGAACA
CTAATGGAAT ATTTTCATGG AAAAATCAAA AATGATGTTT TAGTTGTTGC AAAAGGTGGA
GAAAATCAAA TAAGAATTCA CCAATGTGAT GAAAAAGATT GTCCAGTTTG TAATTTATTT
GGCAGAAATC ACGGAAAACA TAGGTATGCA AGCAATCCAG ATGTAGAAGT AGAATTTAAA
AATATAATGC CTACAAGGTT ATTTGTCAGA GATGCGCTAT TGGATGAAAA TAGTATAACA
GAAGAAATGA AAAAAAATTT AGACAACGAA TTTACTGAAG TCAAACCTGA AAATACTCTT
GATAGGATTA CTTCAGCAGC AAATCCGAGG TTTAACGAAA GAGTTCCTGC TGGTGCTATT
TTTAAATCTG AGTTTGTAAT TAATGTATAT GATGATGATA ACGAAAAATA CTTGAGAGAA
CTTTTAACTG CATTAAGCTT GCTTGAAGAT GATTATTTAG GAGGGTCTGG TTCCAGGGGA
TATGGAAAGG TAAGATTTGA AAATATAAAG ATAGTTTATA AAGGCAAAGG ATATTACGAT
GGTTCAAATA AAGAATTACC TAAAAAAGAA TTAGATGATC TTAATAACTG GGAGGAAAAA
ATTAAAGATT TTAAACTGAA TGGGGATTGA
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| Protein sequence | MVNLEFKGKI IVKADIHVVT GLQIGKENSM EIGGIDNPVI KDSLGKPYIP GSSLKGKLRT
LMEYFHGKIK NDVLVVAKGG ENQIRIHQCD EKDCPVCNLF GRNHGKHRYA SNPDVEVEFK
NIMPTRLFVR DALLDENSIT EEMKKNLDNE FTEVKPENTL DRITSAANPR FNERVPAGAI
FKSEFVINVY DDDNEKYLRE LLTALSLLED DYLGGSGSRG YGKVRFENIK IVYKGKGYYD
GSNKELPKKE LDDLNNWEEK IKDFKLNGD
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