| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1652 |
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| Symbol | |
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| ID | 5298323 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | + |
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| Start bp | 1641429 |
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| End bp | 1641707 |
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| Gene Length | 279 bp |
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| Protein Length | 92 aa |
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| Translation table | 11 |
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| GC content | 24% |
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| IMG OID | 640769929 |
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| Product | CRISPR-associated Cas2 family protein |
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| Protein accession | YP_001306881 |
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| Protein GI | 150021527 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1343] Uncharacterized protein predicted to be involved in DNA repair |
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| TIGRFAM ID | [TIGR01573] CRISPR-associated endoribonuclease Cas2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.175728 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGAGAAGTA TTAAATACAT ATTAGTTGTC TATGATGTAA ACGAAAAAAG AATAAATAAG
GTTCATAAGG TATTGAAAAA ATATATTATT TGGCAACAAA ACTCTACTTT TGAAGGGAAT
GTAACACAGG CAAACATCAA GAGAATGATT TATGAACTAA ATAAAAAAAT AAATAGCAAA
GAAGATAGCA TACTAATATA TTTTTTCAAT TCCAAAACAG TTATAAGAAA AGAAGTAGAT
GGAATTGAAA AATGGAATGT TTCAAGTAAT TTTATCTAA
|
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| Protein sequence | MRSIKYILVV YDVNEKRINK VHKVLKKYII WQQNSTFEGN VTQANIKRMI YELNKKINSK
EDSILIYFFN SKTVIRKEVD GIEKWNVSSN FI
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