| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1648 |
|---|
| Symbol | |
|---|
| ID | 5297136 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermosipho melanesiensis BI429 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009616 |
|---|
| Strand | - |
|---|
| Start bp | 1636022 |
|---|
| End bp | 1636756 |
|---|
| Gene Length | 735 bp |
|---|
| Protein Length | 244 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 29% |
|---|
| IMG OID | 640769925 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001306877 |
|---|
| Protein GI | 150021523 |
|---|
| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG4987] ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTAGAA AGTTAGAGTT TTCAAACGTA ACTTTTCAAT ACAAAAATAA AAAGATATTA
GATAACTTTA ATTTAACAAT AAAACGGGAC GAAAAATTGG CAATAGTAGG TTCAAGTGGG
GAAGGAAAAA CTACACTTAT TAGATTACTA TTAAGATACA TTTCTCCACA TTCTGGAGAA
ATATTTGTAA ATAAAAAAAG CATAAATGAG ATTGAAGATT GGTATAAAAT GATAGGAGTC
TTAAGCCAAA GAGCACACAT TTTTAACAGA AGTATCAAAG ACAATCTATT AGTTGCAAAT
CCAAATGCAA AAGAAAAAGA TATGTATAAA GCGCTTGAAA TGGCTGGGTT AAAAAAATTT
ATGGAAACAA AAACTTTGGA TTTTGTTTTA GGTGATGAAG GAAAATACAT ATCAGGAGGT
GAAAAAGCAA GAATTGCACT TGCCCGCTTG TTATTAAGAA ATCCTGAAAT AGTAATTCTT
GATGAACCAT TAGAAGGTGT AGACAAACTT GTTGAAAGAG AAGTAGTTGA AAATATAAAA
GAATTCGTTA AAGACAAAAC TTTGATATTA ATATCTCATA GATTTTCAAT CCTATCGATA
ACAGATGAAT TTGCAGTATT AGAAAATGGA AAAATAGTTG AAAAAGGAAA ATACGATGAA
CATTCTGAAA ACAGCTTACT AAAAAGATTT TTCAAAGCAG AAGAAGAACT AACAAAAAAA
TTCAGAAAGG ACTGA
|
|---|
| Protein sequence | MFRKLEFSNV TFQYKNKKIL DNFNLTIKRD EKLAIVGSSG EGKTTLIRLL LRYISPHSGE
IFVNKKSINE IEDWYKMIGV LSQRAHIFNR SIKDNLLVAN PNAKEKDMYK ALEMAGLKKF
METKTLDFVL GDEGKYISGG EKARIALARL LLRNPEIVIL DEPLEGVDKL VEREVVENIK
EFVKDKTLIL ISHRFSILSI TDEFAVLENG KIVEKGKYDE HSENSLLKRF FKAEEELTKK
FRKD
|
|---|
| |