| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1642 |
|---|
| Symbol | |
|---|
| ID | 5297554 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermosipho melanesiensis BI429 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009616 |
|---|
| Strand | + |
|---|
| Start bp | 1630093 |
|---|
| End bp | 1631208 |
|---|
| Gene Length | 1116 bp |
|---|
| Protein Length | 371 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 26% |
|---|
| IMG OID | 640769919 |
|---|
| Product | YhhN family protein |
|---|
| Protein accession | YP_001306871 |
|---|
| Protein GI | 150021517 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3714] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.450211 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAAAGGT TGGTTGTTTT CTTTTTGTTT TCTGTTATTA TGCTTTTTGG AGTAGAATTT
GAATTCAAGA TTCCAATTTT TGATGTAGAA AATGGAATTT ATGAGATTTA TAAGTTTGAA
AAAGACAATA AAGTGGAATA TACCGTTGTG TTTTTTGATG AAGATCATCC AAATTTTTTT
ATTGATTTTG TCTATGATGT GTTTAGACTT TTTAAATGGG GAAGAATTTA CGATGTTGAA
AGCTTTTTGG TGGAAGGTAC TAATATAATT TTTAAAGATG ATTTTTGTAT TTCGTCTAGC
TATTTTCAAG TGGAAAATTT GCATAATTAT GCAGAGTTAC CTTTAAAGGA TTTTGAAAGT
AAAAATGGAA AAATAATAAT TTACGTTAGT ACTTGGAATC ATATGTTTTC AAATATCTCA
CTAAATGATG TAAAATATGC TTCTTTTTCA TCTACTCCTT TGCTAGGAGA TAGAAATTAT
GTAGAGGAAA AGTTTAGAGG AAATCCTAGA TTGATTTTTA GTCTTTTGTT TGCCGTTCTA
GTAATTTTTT TTGGTATTCT TACTATGGTA AGAAAATCTC AAAATAGGGA TGCAGTCTTT
TTTAAAGTGT TTACTACGTT GTTTTGTCTT TTGATTGCAA TGGTAAATTC ATCTGGTGTT
GAATGGTTGT TGGTTTTGGG TCTTTTTTTT GGAGTTGTAG GTGATTATTT TATGGAGTTT
GATGAGAAGT TTTTGTATGG AATGTTTTCT TTTTTTGTTG GTCATATTTT TTATTCATTG
GGATTTTTAT TAAAATTTGG GATACCAAAA TTTAGTATTT TTATTTTAAT TTATTTCTTT
TTCTTACTTT TTTATTTCAT AATTTTATCG AAGCAAGTTG ATTTAAAAGT TCCAATGTTT
CTATACGGTC TTGCAATAAG TACAATGTTT GTTTTTACAT TTTCTTCAAT AGATAAAATG
GGATATTTCC TACCTTTAGC TGGTGTGCTT TTTATCTTTT CTGATTTTTT AATTGTAGTT
GATAAATACA TAAAGAAAAT ACCTTTATCA AATGTGTTAA TTTTAAGTAC TTATTTTTCT
TCGCAATTGA TTATTTCATT GTCAATTATC TTTTAA
|
|---|
| Protein sequence | MKRLVVFFLF SVIMLFGVEF EFKIPIFDVE NGIYEIYKFE KDNKVEYTVV FFDEDHPNFF
IDFVYDVFRL FKWGRIYDVE SFLVEGTNII FKDDFCISSS YFQVENLHNY AELPLKDFES
KNGKIIIYVS TWNHMFSNIS LNDVKYASFS STPLLGDRNY VEEKFRGNPR LIFSLLFAVL
VIFFGILTMV RKSQNRDAVF FKVFTTLFCL LIAMVNSSGV EWLLVLGLFF GVVGDYFMEF
DEKFLYGMFS FFVGHIFYSL GFLLKFGIPK FSIFILIYFF FLLFYFIILS KQVDLKVPMF
LYGLAISTMF VFTFSSIDKM GYFLPLAGVL FIFSDFLIVV DKYIKKIPLS NVLILSTYFS
SQLIISLSII F
|
|---|
| |