| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1620 |
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| Symbol | aspS |
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| ID | 5297083 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | + |
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| Start bp | 1608402 |
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| End bp | 1610147 |
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| Gene Length | 1746 bp |
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| Protein Length | 581 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 640769897 |
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| Product | aspartyl-tRNA synthetase |
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| Protein accession | YP_001306849 |
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| Protein GI | 150021495 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0173] Aspartyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00459] aspartyl-tRNA synthetase, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTACAGAA CGCATAATTG TGGGGAATTA AGGAAAAAAG ATGTAGAAAA AGAAGTAATA
CTTTCAGGAT GGGTTGACAG GATAAGAGAT CTTGGAGGAA TTAAGTTTAT AATTTTAAGG
GATCGTTATG GAAAAACTCA ACTTGTTGTT AACCCAAATT CTCCGGCTTA TGAAATTTCT
CAAGAACTTG GAAGAGAATG GGTGATCCAG GTTTATGGGA AGGTTTTAGA AAGGCCGGAT
GAAACAAAAA CAGAAATGGT AACTGGTGAA ATTGAGGTTG AAGTAAATAA GATAAAAGTT
TTATCAAAAT CAGATGTGCC TCCATTTTAT CCTGGAGAAA ATGTTTCTGA GGATTTGAGG
TTAAAGTATA GGTATATAGA TTTAAGAGAT GAGAGAATGC AAAAAAATTT GATTATTAGG
CATAAGATGG CACAGGCAGC AAGGGAATTT TTAAACAAAC ATGATTTTCT TGAAGTTGAA
ACTCCATATT TAACCAAAAG TACACCAGAA GGAGCAAGGG ATTTTCTTGT ACCATCTAGA
TTGCAGAAAG GAAAGTTTTA TGCTTTACCA CAATCTCCAC AGTTGTTTAA GCAAATTTTA
ATGGTATCAG GTTTTGATAG ATATTATCAG TTTGCGAGAT GTTTTAGAGA TGAAGATTTA
AGGGCAGATA GACAACCTGA ATTCACGCAA ATTGACATTG AAATGTCTTT TGTGAAAATG
GATGAAATTT TGGACTTAAT GGAAAGTTTT GCAAGATTTG TCTTTGGAAA AGTAGGAATT
AAGCTTCCTG AAAAGTTTGA TAGATTGAGT TATGAAGAGG CAATGGAGTT ATATGGAAGT
GATAAGCCAG ATAGAAGATA TGGAATGCAA TTGCAAGATT TTACGAATTA TTTTGTAAAT
ACTGAGTTTA AAGTAATAAA AAATGTTTTG GAGAGATCAG GTAGTGTAAA GGGGTTTATA
ACAACCATTC CTATCAGCAG AAAGATAGCA TCTCAATTTG AAGAGTTTGT AAAGCAATAC
GGTTTGGGTG GATTGTTGTG GTTTAAGTTG GATGATGAGA TTGTTTCACC AACAGCAAAA
TTCTTAAAGG AAAGTTATAA AAAAATTGTG AAAGAATATA ATCTAGATAA AGGGTCTGTG
GTTTTACTTG CTGCACATGA AAACAGGGAA ATTTTGAATA CTGCCTTAGG AGCATTGCGT
TTAAAAGTTG GAAAAGAGTA TTTTAATGAA TTGGAAAAAG TATTTGATGC TCTTTGGATA
GTTGATTTTC CATTTTTAGA GTGGAACGAG GAGGAAAGTA GATTTGAAGC AAGGCATCAT
CCTTTTACTA TGCCAAAAAA TTTGGAACAA AAATTGGAAG ATATAAAAGC GTATGCATAT
GATATGATAT TAAATGGAAT GGAAATTGGT GGAGGTAGTA TAAGAATACA TGATAGTGAA
GTTCAAAAAA GAGTGTTTGA AATTATTGGA CTAACTGAAG AAGAGGCTAA TGAAAAATTT
GGCTTTTTTA TTAGTGCATT AAAGTATGGT GTTCCGCCGC ATGGGGGTAT AGCGTTTGGT
TTTGATAGGA TGGTTTCAAT TGCGGCAAAT GTTGCATCAA TTAGAGATGT AATTGCATTC
CCAAAAACCT CTAGTGGAAT CTGTCAGTTA ACTGGAGCAC CATCCACCGT TGAAGAAAAA
CAGTTAAAAG AACTATCAAT TCAAATTTTT AAGGGAGGTA TTGAAAATGA AAGGAACGAA
AGTTGA
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| Protein sequence | MYRTHNCGEL RKKDVEKEVI LSGWVDRIRD LGGIKFIILR DRYGKTQLVV NPNSPAYEIS
QELGREWVIQ VYGKVLERPD ETKTEMVTGE IEVEVNKIKV LSKSDVPPFY PGENVSEDLR
LKYRYIDLRD ERMQKNLIIR HKMAQAAREF LNKHDFLEVE TPYLTKSTPE GARDFLVPSR
LQKGKFYALP QSPQLFKQIL MVSGFDRYYQ FARCFRDEDL RADRQPEFTQ IDIEMSFVKM
DEILDLMESF ARFVFGKVGI KLPEKFDRLS YEEAMELYGS DKPDRRYGMQ LQDFTNYFVN
TEFKVIKNVL ERSGSVKGFI TTIPISRKIA SQFEEFVKQY GLGGLLWFKL DDEIVSPTAK
FLKESYKKIV KEYNLDKGSV VLLAAHENRE ILNTALGALR LKVGKEYFNE LEKVFDALWI
VDFPFLEWNE EESRFEARHH PFTMPKNLEQ KLEDIKAYAY DMILNGMEIG GGSIRIHDSE
VQKRVFEIIG LTEEEANEKF GFFISALKYG VPPHGGIAFG FDRMVSIAAN VASIRDVIAF
PKTSSGICQL TGAPSTVEEK QLKELSIQIF KGGIENERNE S
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