| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1592 |
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| Symbol | |
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| ID | 5297290 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | + |
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| Start bp | 1579059 |
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| End bp | 1580336 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 640769869 |
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| Product | thiamine biosynthesis protein ThiC |
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| Protein accession | YP_001306821 |
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| Protein GI | 150021467 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0422] Thiamine biosynthesis protein ThiC |
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| TIGRFAM ID | [TIGR00190] thiamine biosynthesis protein ThiC |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000634578 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACTTTGA TTGACAGGAT AAAAAAAGGT GATATACCAG ATTTTTTGGA AGAAGTTGCA
AAATCTGAAA ATGTAAGTGT TGATTTTTTA ATAAGTGGAA TTTTGAATGG AACTATAGTT
ATTCCAAACA ATAAAAATCA TTCTTCACTA AGAAAGTACA TGGCAATAGG GGAAAGTTTA
AAGATAAAGG TTAATGCAAA TATTGGAACT TCACTTGGAT ATGATGATTT TGAGTATGAA
TTAAAAAAGT TTCATACTGC ACGAAAATTT GGTGCAGATA GCGTTATGCT GTTATCTACT
TGGGGGGATA TTGAAAAGCA ACGTGAGAAA ATAATAAATA TGTCTGATAT TCCAATTGGG
ACTGTTCCTA TATACGATGT TGCAGTTGTT GCGTATATGG AGCATAAGAA TGTGGTTGAT
TTTTCTGAAA AAGATTTTTT GAAAATTTTG GAAAACCATG CAAAACAAGG TGTTGATTTT
GTTACATTAC ATGTGAGTAT AACTAAAGAT ATAGTGAAAA AATTAAAAAA TTCAAAGAGA
ATAATGAGAA TCGTTAGTCG TGGTGGTTCA ATTATTTCTG GTTGGATAAT TAAAAATGAT
TTAGAAAATC CCTTTTATAA ATACTTTGAC GAAGTATTAG ATATTGCAAG AGAATATGAT
GTGACATTGA GTTTAGGTGA TTCACTTAGG CCAGGAAATC TTTTTGATTC TATGGATAAA
CTACAATTGG AAGAATGGTT TATATTTGAA GAATTAGTTG AAAAAGCGCG AAAAAAGAAT
GTACAGGTAA TTTTGGAAGG GCCTGGTCAT GTGCCAATTA ATCAGATAGA ATCTACAGTT
CAACTAATGA AAAAATATGG GAAAAATTCT CCTGTATTTT TACTTGGACC AATTGTTTTG
GACATTGCAC CTGGTTATGA TCATATTACT TCTGCAATTG GAGCCGCAAT TGCAGCCAAA
AGTGGAGCAG ATTTTATCTG TTATGTAACA CCATCAGAAC ATCTTTCATT GCCATCTGTG
GAGGATGTAA AATTAGGGGT TATTTCTTCA AAGATAGCAG GTATGGCTGT TGATTTTTCC
AGAGGAAAGC ATATAGAAGA AAATTATAAA CTAGCACTCT TTAGAAAGAA TTTAGATTGG
GATGGAATAA AAGATGTAGT TTTAGATAGG GAAATTGTGG AGGAGTATTT GGACAGTAAG
CCATTTAAAG GAGAAGGCTG TTCTATGTGT GGGCCGTTTT GTTCGTTAAA AATTGTAGAG
GAGTATTTAG AAAAGTGA
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| Protein sequence | MTLIDRIKKG DIPDFLEEVA KSENVSVDFL ISGILNGTIV IPNNKNHSSL RKYMAIGESL
KIKVNANIGT SLGYDDFEYE LKKFHTARKF GADSVMLLST WGDIEKQREK IINMSDIPIG
TVPIYDVAVV AYMEHKNVVD FSEKDFLKIL ENHAKQGVDF VTLHVSITKD IVKKLKNSKR
IMRIVSRGGS IISGWIIKND LENPFYKYFD EVLDIAREYD VTLSLGDSLR PGNLFDSMDK
LQLEEWFIFE ELVEKARKKN VQVILEGPGH VPINQIESTV QLMKKYGKNS PVFLLGPIVL
DIAPGYDHIT SAIGAAIAAK SGADFICYVT PSEHLSLPSV EDVKLGVISS KIAGMAVDFS
RGKHIEENYK LALFRKNLDW DGIKDVVLDR EIVEEYLDSK PFKGEGCSMC GPFCSLKIVE
EYLEK
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