| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1539 |
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| Symbol | |
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| ID | 5296852 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | + |
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| Start bp | 1529844 |
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| End bp | 1530530 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 640769816 |
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| Product | alanine racemase domain-containing protein |
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| Protein accession | YP_001306769 |
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| Protein GI | 150021415 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0325] Predicted enzyme with a TIM-barrel fold |
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| TIGRFAM ID | [TIGR00044] pyridoxal phosphate enzyme, YggS family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.237332 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGAGTA AACTAGAAAT AAGGTATTAT AATGTATTAG ATTCAATTAA GGAGAAAGCA
TTGGAAGTTG GAAGAGATTA TAATAACATA AAGCTTGTAG CAGTCAGCAA GACTTTTCCA
GTTGAGGTGA TAAAAGAGGC ATATGAAATA GGAATAAGAA TTTTTGGAGA AAATTATGCA
CAAGAATTGA GGGATAAATC AAAACTGTTG GAAAGTTACG ATATTGAATG GCATTATATT
GGAAGAATAC AGTTAAATAA ATTAAAGTAT ATTGTTCCTG TTTCAAGATT GATTCATTCT
GTAACGAGGA TAGAGGAACT TAAAGAGATT AATAAATTAT GTAGGAAATA TAATAAGGTT
CAAGAGATCT TAATTCAGGT TAATATTTCA GGGGAAGAAA CTAAAGCAGG TTTAAAACCA
GATGAAGTCG GTGATTTTTT GAGGGAAACT GTAGATTTTG AAAGGGTAAA GATAGTAGGT
TTTATGACTA TGGCCCCTTT TACAGATAAT AAAGAAATTA TTAGAAACGT TTTTAAAAAC
GCAAGAGTAT TACTGGAAAA ATTTTCATCT GAATTTTCTA ATTTAAAGGA ACTTTCCATG
GGGATGTCAA ATGATTATTT AATAGCAATA GAAGAAGGTG CTACGATTTT GAGAATTGGT
AGTAAAATTT TCGGGGAAAG AGGGTGA
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| Protein sequence | MKSKLEIRYY NVLDSIKEKA LEVGRDYNNI KLVAVSKTFP VEVIKEAYEI GIRIFGENYA
QELRDKSKLL ESYDIEWHYI GRIQLNKLKY IVPVSRLIHS VTRIEELKEI NKLCRKYNKV
QEILIQVNIS GEETKAGLKP DEVGDFLRET VDFERVKIVG FMTMAPFTDN KEIIRNVFKN
ARVLLEKFSS EFSNLKELSM GMSNDYLIAI EEGATILRIG SKIFGERG
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