| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1531 |
|---|
| Symbol | |
|---|
| ID | 5297820 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermosipho melanesiensis BI429 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009616 |
|---|
| Strand | + |
|---|
| Start bp | 1522341 |
|---|
| End bp | 1522766 |
|---|
| Gene Length | 426 bp |
|---|
| Protein Length | 141 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 29% |
|---|
| IMG OID | 640769808 |
|---|
| Product | transcriptional regulator, TrmB |
|---|
| Protein accession | YP_001306761 |
|---|
| Protein GI | 150021407 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1846] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.02316 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTCAAAAA AGGTTGAAAA TTTATTAAGA GATATTTGTT TTAGGATAAA AGTAAAAGGT
AGGGAAGTTT TAAAGGAATT TCCAATAACC CCTGCACAGT TTGATCTAAT GCAAAAACTT
TATTTTGCTG GAGAACAAAC CATGACTGAA TTAAGCCGAA TGTTAGGTAT TGCAAAAAGT
ACTACAACTG GATTAGTATC AAGATTGGAG AATGAAGGTT TTGTGGAAAG AAAAAGAAGA
AAAAATGATA AAAGGATTAT TATAGTGGTT TTAACAAAAA AAGGTGAATA TGTTATTGAT
AAGGTAATTT TCAAAAGAAT AGAATTTGTT GAAGAGGTTT TAAAAGATTT TGATAATAAT
TCTAAAGAGG TATTAGTTTC ACTACTGGAA AAACTTAACA ATTCGGTAAA AAGACGTGGG
GGATAA
|
|---|
| Protein sequence | MSKKVENLLR DICFRIKVKG REVLKEFPIT PAQFDLMQKL YFAGEQTMTE LSRMLGIAKS
TTTGLVSRLE NEGFVERKRR KNDKRIIIVV LTKKGEYVID KVIFKRIEFV EEVLKDFDNN
SKEVLVSLLE KLNNSVKRRG G
|
|---|
| |