| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1503 |
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| Symbol | |
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| ID | 5296501 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | + |
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| Start bp | 1489007 |
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| End bp | 1490029 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 640769780 |
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| Product | ribosomal RNA large subunit methyltransferase N |
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| Protein accession | YP_001306733 |
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| Protein GI | 150021379 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0820] Predicted Fe-S-cluster redox enzyme |
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| TIGRFAM ID | [TIGR00048] radical SAM enzyme, Cfr family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.578618 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAACA TTTTGGATCT TAAATATGAA GAGTTGGTAA ATGAATTTCA AAGAATTGGA
TTGGAAAAGT ATAGAGTTGA TCAAGTATTA AATTGGATTT ATAAAAAGAA GGTATTCGAA
TTTGAAAAGA TGACAAATCT TTCAAAGGAG CATAGAAAAT TATTAAGTGA AAAATTTTTT
ATAGATCTTC CAAAGTTGTT AGATATGCAA ATTTCAAAAA TTGATAAAAC CACAAAATTT
TTATGGGAAC TTAGGGATGG AAATACAATT GAATCAGTTG CATTATTTCA TTCTGGAAGA
GTTACTGCGT GTATTTCTAC GCAAGTTGGT TGTCCTGTAA AATGTGAATT TTGTGCTACA
GGCCAGAGTG GTTTTGTGCG AAATTTGACA GTAGGGGAGA TTGTAAGTCA AATTTTGGCG
ATAGAGTTAA ACAGAAAAAT AAAAGTTGGA AATGTAGTAT ATATGGGAAT GGGAGAACCT
TTGTTAAATT TTGAAAATGT AATTGATAGT ATAAAAATGT TAAACGATAA AAAAATGTTA
AATATTGGCA TTCGAAGAAT TACAGTTTCT ACAGTTGGAA TTCCAGAAAA AATTATTGCA
CTTGCTGAAA GTGGATTAAA TGTAAAACTT GCATTGTCTT TGCATGCGGT TACTGATTAT
AAAAGAGATC AAATAATTCC CTTGAATAAA AAGTACAGTG TAGAAGAATT GATATATTCG
TTAAGAAAGT ATCAGGAAAT CACTGGGAAC AGAGTTACAA TTGAATATAT TCTTATCAGA
GAATTTAATG ATTATCCTGA AGATGCAATT AGATTAGTTG AATTACTTAG GGGATTAAGT
GTTTATGTGA ATCTTATACC GATAAACCCA GTAAATCCAA AATTTCATAG ACCAAATAGA
TGGGCGTTAG AAAGATTTAA AGAGATTTTA GAGAAGAACG GAATTGAGTG CGAAATAAGA
AAAGAAAAAG GAACTGATAT AGATGCAGCT TGTGGGCAGT TGAGAAGGAG GAAGTTAAGA
TAA
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| Protein sequence | MKNILDLKYE ELVNEFQRIG LEKYRVDQVL NWIYKKKVFE FEKMTNLSKE HRKLLSEKFF
IDLPKLLDMQ ISKIDKTTKF LWELRDGNTI ESVALFHSGR VTACISTQVG CPVKCEFCAT
GQSGFVRNLT VGEIVSQILA IELNRKIKVG NVVYMGMGEP LLNFENVIDS IKMLNDKKML
NIGIRRITVS TVGIPEKIIA LAESGLNVKL ALSLHAVTDY KRDQIIPLNK KYSVEELIYS
LRKYQEITGN RVTIEYILIR EFNDYPEDAI RLVELLRGLS VYVNLIPINP VNPKFHRPNR
WALERFKEIL EKNGIECEIR KEKGTDIDAA CGQLRRRKLR
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