Gene Tmel_1403 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_1403 
Symbol 
ID5298085 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp1405333 
End bp1405668 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content32% 
IMG OID640769678 
Producthypothetical protein 
Protein accessionYP_001306635 
Protein GI150021281 
COG category[S] Function unknown 
COG ID[COG4828] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.205259 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCTTCC AAGAAGAAAT AGTAGGATAT TTTGGCGCAT TTTTCCAAGT ACTTGCTACT 
ATAGTTATTA CATCTGGAAT AATAAAAGCA TTTGTCATTT TCATAAAAGA TGCACTATTA
AAAAAGGAAT CCAATGAAGC AATTAAAGAA AGCAGATTAG AGATTGGTCA TTCCTTTTCT
TTGGGATTAG GTATACTAAT TGGATCGAGT ATTCTAAAAA CCACCATTGC TCCTAGTTGG
AATGATATAG GCCAGCTTGC TGCAATTATT GGAATTAGAA CACTTCTGAA TTACTTCTTA
AGAAAGGACA TAAAGGAGAT GAACAATAAT GATTAA
 
Protein sequence
MIFQEEIVGY FGAFFQVLAT IVITSGIIKA FVIFIKDALL KKESNEAIKE SRLEIGHSFS 
LGLGILIGSS ILKTTIAPSW NDIGQLAAII GIRTLLNYFL RKDIKEMNNN D