| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1401 |
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| Symbol | |
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| ID | 5298078 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | - |
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| Start bp | 1403698 |
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| End bp | 1404492 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 640769676 |
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| Product | patatin |
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| Protein accession | YP_001306633 |
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| Protein GI | 150021279 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0324222 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAATAG GTCTATCACT TGCTGCAGGT GGGGTAAAGG GATTCTCACA TATTGCAACT
TTAAATTTTT TAGAAGAAAA TAATATAAAA GTAGATATAA TTACCGGTTC TTCTGCCGGA
GCAATTGTTG CTGCATTATA CGGTCTCTAC GGCAACAGTA AAATAGTCTA CAAAAAATTT
TCAAATGCAG TTGAAAAATT CTTCCCAAAT CTAAAAATTT ACACGGAAAA GTTAGAAAAA
TCAAATCTAT GGTCCATCTT CCAAAGGGCG TTAGTTCCAA TTGATGAGTA TTACAAATTT
TTTAAATACT TATTTGAAAG AAAAAAATTT AGTGACTTAA AATACAAAAT TGGAATTGTT
ACATTTGACA CTTTGGACGG AAACTCCTTA CTAATAACCG AAGGATTTTT AGTAGATGCA
GTAATGGCAA GTTCATCTGT GCCTGGAGTC TTTTCACCTT TATGGATTGC AGGAACTCAA
AATACGGACG GAGGAGTTTT GTCTCCCTCT CCAATAAATG AAGCCATAAA ACTCGGAGCT
GATTTTGTAA TAGCTAGTAC CTTTGAAAGA AAACCAAAAA CATTCCCAAA AGACCAACTG
GAATTAATGT ATTATATAGA CACTTGGAAA GAAATTGAAA TAGAGTATGT TGATTTAGAA
AAAGCAAATG TGGTAATATA TTATAGGATT CCCTACCATT GGTATCAATT TCATTTATAT
AAAGAAATTT ATGAATCTTC AATAAAATTT TTAAAAGAGA GGAGAGAAGA ATTTGACCAT
CGCTTTTGGT GGTGA
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| Protein sequence | MTIGLSLAAG GVKGFSHIAT LNFLEENNIK VDIITGSSAG AIVAALYGLY GNSKIVYKKF
SNAVEKFFPN LKIYTEKLEK SNLWSIFQRA LVPIDEYYKF FKYLFERKKF SDLKYKIGIV
TFDTLDGNSL LITEGFLVDA VMASSSVPGV FSPLWIAGTQ NTDGGVLSPS PINEAIKLGA
DFVIASTFER KPKTFPKDQL ELMYYIDTWK EIEIEYVDLE KANVVIYYRI PYHWYQFHLY
KEIYESSIKF LKERREEFDH RFWW
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