Gene Tmel_1328 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_1328 
Symbol 
ID5296903 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp1337166 
End bp1337972 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content32% 
IMG OID640769602 
Productmetal dependent phosphohydrolase 
Protein accessionYP_001306562 
Protein GI150021208 
COG category[T] Signal transduction mechanisms 
COG ID[COG2206] HD-GYP domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCTGAATA AAAAGTTGTT AGATTATATA GAAAAGTACA AAGATGATTT GGGATTTGAA 
AAAGGCGAAA AGAGTATAAA TATATTTAAA GAGGGTGATT TTATAAAGCT TGAAAAGGAT
GGAAAGGTAA TATTTGATTT GGTTGATGAA GAAAAGTATT ACGAGTTACT TCCATTTATA
CTTGAAAAAG TGGTAAAAGG TCATTTGAAT GTTTTGATAA AAGAAAAGGC CGAAGATCTT
ATTGTTGATT TATTGGTTAA TATTATTGTT TTGAGTGAAA TAGAAGATGA AGAGGGATTT
AGCCATACGC AAAGAGTTGC GAAAATGGCA GAAAGGTTTG GGAAATTTAT TGGTATGGAT
GAAAAAGAAT TGAGAAAATT TGTTAAGCAT GCTTATTTGC ATGATGTGGG AAAGATAAGT
TTGGAACAAA TAATGCTTTA TTCTCCTACG AGGATAAGTC TTTTTGAAGA TAATTATCAA
GATCATACAG TTATGGGAAG TATATTTTTA TCAATGTTCG ATGTGTTGTG GGAATATATT
CCAACTGTAA GATACCATCA TGAACGCTGG GATGGAAAAG GTTTTCCAGA TGGTCTTTCT
GGGAAACAAA TACCATTCTA TGCGCGTGTA ATCTCAATTT TAGACTATTT TGACGAGACA
ACGCATTTTA TTTCTTCCGA GTGGGAGGCG GTTTTAAAGA CACCAAAAGA GGCACTCGAG
TTAATAAAAA AACTATCTGG AAGATATTTT GATCCAAATT TGGTTGAAAA ATTTGAAGAA
TTTTTAAAGA GTGAGGGGGT GGTATAA
 
Protein sequence
MLNKKLLDYI EKYKDDLGFE KGEKSINIFK EGDFIKLEKD GKVIFDLVDE EKYYELLPFI 
LEKVVKGHLN VLIKEKAEDL IVDLLVNIIV LSEIEDEEGF SHTQRVAKMA ERFGKFIGMD
EKELRKFVKH AYLHDVGKIS LEQIMLYSPT RISLFEDNYQ DHTVMGSIFL SMFDVLWEYI
PTVRYHHERW DGKGFPDGLS GKQIPFYARV ISILDYFDET THFISSEWEA VLKTPKEALE
LIKKLSGRYF DPNLVEKFEE FLKSEGVV