| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1311 |
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| Symbol | |
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| ID | 5297679 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | - |
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| Start bp | 1320533 |
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| End bp | 1321066 |
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| Gene Length | 534 bp |
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| Protein Length | 177 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 640769585 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_001306545 |
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| Protein GI | 150021191 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAT GTTATTTCTT ATTTTTTTTG ATAATCAGTT CACTCATTTT TGCGCTTCCT
GGTGAATGGT TTAGAGATTT TGTAAGAGAT TATAGAAGCG CTTATGATTT ACCGACAGAT
GATGAATTAC TATTAAAAAT TGAAAATGCA ATTCTCGATG CTTCCAAAGA AACAGGTTTA
GATCCTTTAC TAATAACATC TGTCATAATC GTCGAAAGTG AATTTAGAAA TGTTATTGGA
ATGTATGGTG AACTTGGAAT GATGCAGATA AAACCTGAAA CTGCAGATTT CGTTGCAAAC
TATTATAACT TAGAAAAACC AAAGGAGGGT TGGACAAGAA TTCTTTGGGA TTTTAAATTA
AACATAAAGA TAGGAAGTTA TTACCTAAAA TATCTTTATG ATAAATTCGG AAGTATTCAA
AAAGCAGTAA AACACTACAA CGGCGGAATA TACAAAGAAG TATACGCAGA AAAAATACTG
AAAAAATACA ATCAAATGCT TAAGGTGGCA AGTACTTATG AAAAAAATTC TTGA
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| Protein sequence | MKKCYFLFFL IISSLIFALP GEWFRDFVRD YRSAYDLPTD DELLLKIENA ILDASKETGL
DPLLITSVII VESEFRNVIG MYGELGMMQI KPETADFVAN YYNLEKPKEG WTRILWDFKL
NIKIGSYYLK YLYDKFGSIQ KAVKHYNGGI YKEVYAEKIL KKYNQMLKVA STYEKNS
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