| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1226 |
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| Symbol | |
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| ID | 5298069 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | + |
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| Start bp | 1238626 |
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| End bp | 1240551 |
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| Gene Length | 1926 bp |
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| Protein Length | 641 aa |
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| Translation table | 11 |
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| GC content | 28% |
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| IMG OID | 640769502 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_001306464 |
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| Protein GI | 150021110 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3525] N-acetyl-beta-hexosaminidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.459632 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTATA ATTATTTTGT TTTTTATAAA TTATATCAAA AATTAAACCC AGAATCGTTA
ACTTTTTCAA ATTTCTTTAA AATGTTATAT AATGAAAATG AGGTGATAGA TATGATATTA
ATTCCTAGGC CAAAAAAGTT TGAAATAAAA GATGATGTTT TTGAATTCAA ATCTGGAGAG
TATATTTTTT TATCAACAAA GAACTTATTT AAAAGTGCAG AGAAGGTAAA AAGGGTGTTA
AAAGATTTTG GCGTTGAACT TTTTATTTCA TACTATAAAG GAAGTAAAAC TTCTATATAT
GTTGAGGTAG AAAGGGGAAA AATAAAGGAA AAATCAGGGT ATAAATTAAT AGTTTCTTCA
GATGGCGTAA AGGTATATGG TAATAATAAT CTTGGAGTTC ATTATGGACT TATGACTCTT
GTTCAGATAA TAAGGAACTA TGGTAATACA ATTCCTTTTA TGGAAATACA TGATTGGCCG
GATATAGAAA ATAGAGGAGT ATTGATTGAT ATAAGCAGAG ATAAGGTGCC TAAATTAGAA
ACATTATATT ATATTGTTGA TCTTTTGTCG GAATTAAAAT ATAATCAATT CCAGCTATAT
ACCGAGCATA CATTTGCATA TCGTGAACAT GAGAAAGTTT GGAGAGATTA TTCACCATTT
ACTAGTGAAG ATATTATTAA ACTTGATAAA TATTGTAAGG AAAGATTCAT TGAACTTGTT
CCTAATCAAG CTTCATTTGG TCATATGGAA AAATGGTTAA GCCATAATGA ATATAGTTAT
TTAGCTGAAA CGTTTGAATT TAATACTTCA TGTGGGGAAC ATTATAGTCA TCCTTTTACA
TTGTCACCTG CCGTTAGTGA TTCAATTGAG TTTTTAGATT CTTTGTATAG GGAATTACTT
CCGCATTTTT CGAGTAAACA TTTTAATGTG AATGCAGATG AAACGTTTGA TTTATGTCAA
GGTAAATCAA AACCATTATG TGAGAAACAC GGTAAAGGAA AGGTTTATCT GAGTTTTGTT
TTAAAGATAT ATAATTTGGT AAAAAAATAT GGAAAAAAAA TGATGGTGTG GGCGGATATA
TTAAAAAATT ATCCAGAATT ATTTAATGAT TTACCTAAAG ATGTTGTGTA TTTAATTTGG
GGATATGAAA AAGATCATAA TTTTGATGCT GAGTGTGAGT TATTTAGAGG ATTTGAATTT
TATGTATGTC CAGGTACTTC GAGTTGGAAT TCTTTTTTAG GAAGACTGGA AAATGCGCTT
TTAAACATAA AAAATGCAAC AGAAAGTGGA TTGAAATATG GTGCTAAAGG AATTTTAGTT
ACGGATTGGG GGGATAATGG TCATTGGCAA CATTTACCTA TTTCTTTTCC CGGATTTTTT
TATACTTCAG CTGTTTCATG GGGTTTTGAT AAGAATCAAG ATATAGATCT AAAAGAAGCT
TTGTCTTTAT ATTTTGGAGA ACAAGTTTCT GAAATATTAT TGGAAGTTGG TAATGCTTAT
AAATTACTTG AGTTTGAAGT TCCAAATTCT TCTATTTTTG CATTGGTTTT CATAAAGCCT
GAATTTATAA ATAAAAAGTT TATTTCTAAG TTAAAGATAG AAGCTCTTGT AAAGACTAAA
GATTATTTAG AAGAAAGATT ATCAAAGATA AATATCTTGA ATGATAATTT AATAAAATAT
GAATTAAAAA ATGCCATTGA ATTTTCTATC TTAGCAATTG AAATACTTTT ATCAGCAAGA
AAATCAAAAT TAGATAGCTT AGAAGGTATT TCGCCGGTTG CAAGGGAAGA ATTTTCAATA
AGATTAGAAA AATTGATTAA TGAATTTGAA AAAATTTGGC TTAAGAGAAA CAAAATGGGA
GGTTTAAGCT ATAGCATAGA AAAGTTAAGA AAGATCCAAA ATATTTTTAA GGAGTTAAAA
AAATGA
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| Protein sequence | MSYNYFVFYK LYQKLNPESL TFSNFFKMLY NENEVIDMIL IPRPKKFEIK DDVFEFKSGE
YIFLSTKNLF KSAEKVKRVL KDFGVELFIS YYKGSKTSIY VEVERGKIKE KSGYKLIVSS
DGVKVYGNNN LGVHYGLMTL VQIIRNYGNT IPFMEIHDWP DIENRGVLID ISRDKVPKLE
TLYYIVDLLS ELKYNQFQLY TEHTFAYREH EKVWRDYSPF TSEDIIKLDK YCKERFIELV
PNQASFGHME KWLSHNEYSY LAETFEFNTS CGEHYSHPFT LSPAVSDSIE FLDSLYRELL
PHFSSKHFNV NADETFDLCQ GKSKPLCEKH GKGKVYLSFV LKIYNLVKKY GKKMMVWADI
LKNYPELFND LPKDVVYLIW GYEKDHNFDA ECELFRGFEF YVCPGTSSWN SFLGRLENAL
LNIKNATESG LKYGAKGILV TDWGDNGHWQ HLPISFPGFF YTSAVSWGFD KNQDIDLKEA
LSLYFGEQVS EILLEVGNAY KLLEFEVPNS SIFALVFIKP EFINKKFISK LKIEALVKTK
DYLEERLSKI NILNDNLIKY ELKNAIEFSI LAIEILLSAR KSKLDSLEGI SPVAREEFSI
RLEKLINEFE KIWLKRNKMG GLSYSIEKLR KIQNIFKELK K
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