| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1148 |
|---|
| Symbol | |
|---|
| ID | 5296683 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermosipho melanesiensis BI429 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009616 |
|---|
| Strand | - |
|---|
| Start bp | 1171169 |
|---|
| End bp | 1172302 |
|---|
| Gene Length | 1134 bp |
|---|
| Protein Length | 377 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 27% |
|---|
| IMG OID | 640769426 |
|---|
| Product | CheA signal transduction histidine kinase |
|---|
| Protein accession | YP_001306388 |
|---|
| Protein GI | 150021034 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0643] Chemotaxis protein histidine kinase and related kinases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATTTTA CAGAAATATT TTTATCAGAA CTTTCTGAAA AGTGTATCGA AGCAAAAAAA
ATTATTTCTG AAATAAAAAA AAACAATGAC AAATCACTTA CAAAAGAGCT ATATAGAATA
TTTCACACAA TTAAAGGGTC TGCAAGTCTT GTTAATATGA ACAATTTTTC CAAACTTGCC
CATAAAATTG AAGAATATTT GAAAAAGCGA CTAGAAAATG AAAAAATGCC TGATGAAAAG
TTTTTAGACA ATCTAATTGC AGTTATTTCA AAAATTTCAA ACAAGACAAA AGATTTAACA
GATGAAGAAT TAAATGATCT AATAAAAACA TTGGAAGGCA AAAAGATAGC CGAAGAAGAA
ATAACAATAT CCCAAAGGGA TATTTTTATG CTTTCAGAAA TAAGCGAATT TATTTCACAA
ACCTTAGAAA TAGAAAATAG TGTTATAAGA AACAACAATA AAAAAGCTCT AGCTAAGACA
AAAAATCTAA AGAAACAATT GATAGAAATT TTTGAAAATA TAGTTTTTGT AAAGTTAGAA
AATATTCTCA AAGATTTGGA AGAACTAGTA CAAAGGGAAG CAAAAAAATA TAGTAAAAAA
ATAAAACTTG TTCAAAAAGT AAGAGGAGTA AAAATAGAAA AAGAAGATGT AAAAGATATA
TTAGATATAC TCGTTCACCT CATTAGAAAT TCTATTGCAC ACGGCATTGA AACTCCAGAA
GAAAGAAAAA AAATTGGCAA AGATGAAACG GGTAAAATAG AAATAAAAGC ATACATAGAA
CAAAATAAAA TATTTATAGA AGTATCGGAC GATGGAAAAG GATTAGACTT AGAAAAGATA
GAAGAAAAAG TAAAAAAGCT AAACCTAAAA GTCACCCCAA CAGAAGCAAT ATTTTTACCT
GGATTTAGTT CAAAAGATGA AGTTGATGAA CTTTCAGGAA GGGGTATTGG TCTTGATATG
GTAAAAAATT TTGCAACTAC AAGAGGTGGA GATGTTAAAG TTGAAACAAA AAAAAAACAA
TGGTACAAAG TTTACCATAT TCTACGAAAT GAGAAGTTTT ATCACAAATG TATTGATAGT
AAAAGATGCC AAAAAAACAT TCGCAATAGA AACCTCAAAT ATACTTTTTG TTGA
|
|---|
| Protein sequence | MDFTEIFLSE LSEKCIEAKK IISEIKKNND KSLTKELYRI FHTIKGSASL VNMNNFSKLA
HKIEEYLKKR LENEKMPDEK FLDNLIAVIS KISNKTKDLT DEELNDLIKT LEGKKIAEEE
ITISQRDIFM LSEISEFISQ TLEIENSVIR NNNKKALAKT KNLKKQLIEI FENIVFVKLE
NILKDLEELV QREAKKYSKK IKLVQKVRGV KIEKEDVKDI LDILVHLIRN SIAHGIETPE
ERKKIGKDET GKIEIKAYIE QNKIFIEVSD DGKGLDLEKI EEKVKKLNLK VTPTEAIFLP
GFSSKDEVDE LSGRGIGLDM VKNFATTRGG DVKVETKKKQ WYKVYHILRN EKFYHKCIDS
KRCQKNIRNR NLKYTFC
|
|---|
| |