| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1135 |
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| Symbol | |
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| ID | 5298464 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | - |
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| Start bp | 1158947 |
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| End bp | 1159591 |
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| Gene Length | 645 bp |
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| Protein Length | 214 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 640769413 |
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| Product | 3-oxoacid CoA-transferase, B subunit |
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| Protein accession | YP_001306375 |
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| Protein GI | 150021021 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2057] Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit |
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| TIGRFAM ID | [TIGR02428] 3-oxoacid CoA-transferase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAACCCAA AAGAAAAAAT AGCCATAAGA GTTGCACAGG AACTTAAAAA AGGACAATTA
GTAAATCTTG GCATTGGTCT TCCTACACTA GTTGCAAATT ACATTCCAAA AGATATACAT
GTCTTCTTTC AAAGTGAAAA TGGAATAATT GGAATGGGCC CTGCTCCAAA AGAAGGGTAT
GAAAATAGCG ATCTAACAAA TGCCGGAGCA AGTTATATAA CTGCTTTACC TGGTGCTATG
ACATTTGATA GTGCTTTCTC ATTTGGAATA ATTAGAGGTG GCCATTTAGA TGTAACCGTA
TTAGGAGGTT TACAGGTAGA TGAAGAAGGA CATCTTGCAA ATTGGATGAT TCCGGGAAAA
ATGATTCCAG GGATGGGTGG AGCAATGGAC CTCGTAACAG GTGCAAAAAA GGTTATAGTA
GCTATGACAC ACACCGCAAA AGGAACACCA AAAATAGTTA AAAAATGTAC TCTGCCATTA
ACTTCCATTA GAAAAGTTGA TCTTATAGTA ACAGAACTTG CCGTAATTGA ACCTACCGAT
GAAGGTTTAT TGTTAAAAGA AATATCTAAA GAGACTACTC TAGATGAAGT TCTTAAACTT
ACAGAAGCAA AATTAATAAT CGCTGATGAT CTTAAAATCT TTTAA
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| Protein sequence | MNPKEKIAIR VAQELKKGQL VNLGIGLPTL VANYIPKDIH VFFQSENGII GMGPAPKEGY
ENSDLTNAGA SYITALPGAM TFDSAFSFGI IRGGHLDVTV LGGLQVDEEG HLANWMIPGK
MIPGMGGAMD LVTGAKKVIV AMTHTAKGTP KIVKKCTLPL TSIRKVDLIV TELAVIEPTD
EGLLLKEISK ETTLDEVLKL TEAKLIIADD LKIF
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