| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1099 |
|---|
| Symbol | |
|---|
| ID | 5296729 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermosipho melanesiensis BI429 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009616 |
|---|
| Strand | + |
|---|
| Start bp | 1126113 |
|---|
| End bp | 1127399 |
|---|
| Gene Length | 1287 bp |
|---|
| Protein Length | 428 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 640769381 |
|---|
| Product | peptidase S41 |
|---|
| Protein accession | YP_001306343 |
|---|
| Protein GI | 150020989 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0793] Periplasmic protease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.257556 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGTTGCAG CCAAAATCGA ACCAGAAAAA CTCCAAAGGG ATTTTGAATT CATTATTACC
CTTTTAAAAG AAGCGTACAT CGACCCATAT GAACTGGTTG AGAGCCCGGA ATTTACGAAG
ATTGTTGATA GTGTAAGAAA GAAACTCGAT AAACCCATGG ATAGCTTTGA ATTTTTTAAA
GCGGTTTCCC CTATTTTTCA TTACCTGAAT GATTACCATT GCAATATTGA GTTTCCCATT
TCATATGATT TTCAAATCTT TCCAATGACT CTTTATGTTG TAAACGATAA TATCTACGTT
GTCTTTTCAC TGGTCGACGA TATACCGGTA AAGTCAAAAG TTCTGGCAAT CGACGGAATC
CCTTCGGCAC AAATAATAAA GGAGTTTGAA CAGTATACCA ATACAAGAGA AAACACTTCC
CTGAAAGAAC GTGAAATCTC CCGGCGTATC AATCTGATAC CGACGTTTTG GAATAAAAGA
AGTGTGGAAA TAGAGTTTGA ATACGACGGT TTTACAAAGA GAGAAAAGGT AAGTGCTGTA
ACGATAAGGG AATATAGAAG AAAAGTTCAG AAATCTGAGA AATCGAAGTT ACCGTACGAA
TTTGAAAGGA AAGGAAGTAT AGGAATATTA AGAATATGGA GTTTTAAATT TAAAGGGAAT
TTATTTGCTG ATTTTAGGGA GTTTTTAAAT GAGGTTTTTG AGAAAAATAA GGATATGACA
GATTTGGTCA TAGACATAAG AAGAAACTTC GGTGGCCGTT TGCGAATTGT ATTTGAAGTG
TTGGGACATT TTGTAGATAA GCGGCTCTTC GTAAAGCACA AAGTTAAGGT GAAAAACTCC
AAGTACAACG ATCAGGAGGC TTTAGCAAGG GTAGGGGTTC GTTACGACAA AAACGCCGAG
GGAAAGATAA TTGAAACGAC TTCCTCGTGG GTTATAACCC CAAGAAATCC AGTATTTAAA
GGAAGGGTAT GGGTGCTTGT CGATAACGGT ATAGCTTCTG CCGCAATAAT TTTTGTAGAC
ATTGTCCAAA AGTATGGGAT AGGAAAGATA GTGGGAGAAA AACCGGTCTA TTCACCGAAT
CTTACAAGTG AAGGTACCGA ACATTATCTA CCAAACGTAA AGACTTATGT TTTTATTCCA
GGTTCGTTGT ACATATTCTG TCCTCAATCA AACAGAATAA TTCCGGATTA CGAACTTGTA
ATAACGACAG AGGAAAAACT CGAATGGTTG ACGGGAAGTT CCGATCCTGT TCTTGAAAGG
GCGATAGAAA TTATTGAGAA CAACTAA
|
|---|
| Protein sequence | MVAAKIEPEK LQRDFEFIIT LLKEAYIDPY ELVESPEFTK IVDSVRKKLD KPMDSFEFFK
AVSPIFHYLN DYHCNIEFPI SYDFQIFPMT LYVVNDNIYV VFSLVDDIPV KSKVLAIDGI
PSAQIIKEFE QYTNTRENTS LKEREISRRI NLIPTFWNKR SVEIEFEYDG FTKREKVSAV
TIREYRRKVQ KSEKSKLPYE FERKGSIGIL RIWSFKFKGN LFADFREFLN EVFEKNKDMT
DLVIDIRRNF GGRLRIVFEV LGHFVDKRLF VKHKVKVKNS KYNDQEALAR VGVRYDKNAE
GKIIETTSSW VITPRNPVFK GRVWVLVDNG IASAAIIFVD IVQKYGIGKI VGEKPVYSPN
LTSEGTEHYL PNVKTYVFIP GSLYIFCPQS NRIIPDYELV ITTEEKLEWL TGSSDPVLER
AIEIIENN
|
|---|
| |