Gene Tmel_1076 details

Gene Information

• Locus tag: Tmel_1076
• ID: 5296805
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermosipho melanesiensis BI429
• Kingdom: Bacteria
• Replicon accession: NC_009616
• Strand: +
• Start bp: 1102757
• End bp: 1103341
• Gene Length: 585 bp
• Protein Length: 194 aa
• Translation table: 11
• GC content: 28%
• IMG OID: 640769359
• Product: hypothetical protein
• Protein accession: YP_001306321
• Protein GI: 150020967
• COG category: [S] Function unknown
• COG ID: [COG2852] Uncharacterized protein conserved in bacteria

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 0.000229233
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGATAGATA CGGATTTCCA TGTTACGTCA ATTGAGCCAG AAGATATTAG GATAGATAAT 
ATCAAAAATC CAGGTCCAAA GCTTTTAAAA GAATATTTAA AATATGTAAA AGCAGTTTCG 
TTAAATGATA AAAAAGGAGC AGAAGAAATT CTATATTCAC TTTCAAATAT AAGTTCAAAG 
GATGAGTTAA TATTTGAAAG TGATTTTGAG GAAGAAGTAT ATGAAAAGCT TAGTCAAAGT 
AAAATAATAA AAGAAGGAAA CTTAGAACTT CATACACAAG TTAGTTCATC TGGTTATAGA 
ATTGATATAG GAGTGTATGC TCCTATACAA TCAAAGTATA TACTTGGAAT AGAATGTGAT 
GGTGCTTTAT ATCATAGTTC AAAATCAGCA AGAGAAAGAG ATATACATAG GCAAAAATTT 
TTAGAATCAA GAGGTTGGAA GATAGTAAGG ATATGGAGTA GGGATTGGTG GAGTAATCCT 
GAAAAAGAAA TTGAAAAAAT TGAAAGTATT CTAGAAAAAA TGAATTATGA ATTAAACCAG 
TATAATGATG AAAAAATTAC TGAAGAACTG CTTACAAATG ATTGA 

 

Protein sequence

MIDTDFHVTS IEPEDIRIDN IKNPGPKLLK EYLKYVKAVS LNDKKGAEEI LYSLSNISSK 
DELIFESDFE EEVYEKLSQS KIIKEGNLEL HTQVSSSGYR IDIGVYAPIQ SKYILGIECD 
GALYHSSKSA RERDIHRQKF LESRGWKIVR IWSRDWWSNP EKEIEKIESI LEKMNYELNQ 
YNDEKITEEL LTND