| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1043 |
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| Symbol | |
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| ID | 5296498 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | - |
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| Start bp | 1071247 |
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| End bp | 1072395 |
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| Gene Length | 1149 bp |
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| Protein Length | 382 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 640769327 |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_001306289 |
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| Protein GI | 150020935 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.504589 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACCGAAA TAATGGGAAA ATACGAAACT CCTTTTTATT TGTATTTTGA AAAGACACTT
ATTGAAAGAA TATCAATGGT GAAAGATGTA TTTAAAGAAG CAAACATATT TCCAACATTT
GCGGTAAAGG CAAACAACAA TCCTCACTTG TTAAAAATTA TCGCAAAAAA CGGTTTTGGA
ATGGACATAT TAGGTGAGGG AGAATTACAC GCATGCAAAT TGGCAAATAT CCCAGGGGAA
AAAATTATCT GGAACGGAAA TGGAAAAACG GAAAAACAAA AAAAGGTAAT GAAAGAATAC
GGTGTAAACT ACGTAAACAT AGATAGCAAA GAAGAATTTG ACCTTCTTTG GAAAACTGAA
GAATCATTCA ACCTATTTTT ACGTGTAAAT CCAGATATAG ATGCAAAAAC ACACCCGTAT
ATATCAACAG GGTTAAAAAG TCACAAATTT GGCGTGTCAT TTAACGTAGC AAAAGATATA
CTTAAAAGTG GAAAAATAAC GGGACTACAC CTACATATTG GTTCACAAAT TACAGATGTT
GAGCCTTTTA AAGAAGCCAT AGAAAAAACC TTAGAACTAG CAAAAAAGTA CAATATAAAA
CATATAAACA TTGGTGGGGG TTGGGGGATA AGCTACAACG AAGAAAAAGA ACTAGACCTT
GAAAAATACA AAAAAGAAGT AATTCCTTTT TTGTCCGAAT TTGATATGGT AATAAACGAA
ATTGGAAGAT TCATTATTGC TCCTGCAGGA GTCTTAGTTA CAAAAGTAAT TTTAGTTAAA
GAAACTGAAA ATAAAACGTT TGTTGTAGTA GAAAGTGGTA TGAACCACCT TATTCGCCCT
GCGCTATACA ACGCATACCA CGAAATAGAG GTCTTAAACA ACAGCTTAGA GTATATTAAG
GCCGATATCG TAGGACCTTT ATGTGAAACT GGAGATTTTC TTGCAAAAGA TAGGAAAATA
AAAAAAGTCA ATACAAATGA TATACTCATC ATTAAAAACA CAGGTGCATA TGGTTACTCC
ATGTCAAATA ACTACAACGG TACAACAAGA CCTGCAGAAG TATTGGTAAC AGTGGATGGG
AAAGACATTT TAATTAGAAG GAAAGAAACA ATCGATGATT TATTTAGAAA CATAACAAAA
ACGGGCTAA
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| Protein sequence | MTEIMGKYET PFYLYFEKTL IERISMVKDV FKEANIFPTF AVKANNNPHL LKIIAKNGFG
MDILGEGELH ACKLANIPGE KIIWNGNGKT EKQKKVMKEY GVNYVNIDSK EEFDLLWKTE
ESFNLFLRVN PDIDAKTHPY ISTGLKSHKF GVSFNVAKDI LKSGKITGLH LHIGSQITDV
EPFKEAIEKT LELAKKYNIK HINIGGGWGI SYNEEKELDL EKYKKEVIPF LSEFDMVINE
IGRFIIAPAG VLVTKVILVK ETENKTFVVV ESGMNHLIRP ALYNAYHEIE VLNNSLEYIK
ADIVGPLCET GDFLAKDRKI KKVNTNDILI IKNTGAYGYS MSNNYNGTTR PAEVLVTVDG
KDILIRRKET IDDLFRNITK TG
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