| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1028 |
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| Symbol | |
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| ID | 5296796 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | - |
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| Start bp | 1056104 |
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| End bp | 1058668 |
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| Gene Length | 2565 bp |
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| Protein Length | 854 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 640769312 |
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| Product | hypothetical protein |
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| Protein accession | YP_001306274 |
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| Protein GI | 150020920 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTAAAGA TACCAGTTAG AAATATTATT AAAAATTGGA AAACATCACT TTTGGTAATC
TTAGGAAGTA TGATAGCAAC TATGCTAGTG GTAGGAGCAC TATCACTAAA TGATTCCGTT
GATAACTGGT TTGCCCAGAA AATCAAAAAC AACTTTGGAA ACATAGATAT CGTTGCAAAA
GATAAAAGTG ATACATTCTT TTTCCCTAGA ACACTTGACG TAAATAAAAT AAGTCAAATG
TTAAGTTATC TAAAGTCAAC AAATAAAATC AAGGATTACG TATTTGTTGA GCTAGTGTCC
ACAAGGATAA AATACGGTAA TAACTTTGCA GATGTATTTG CAATAGGTTA CGATGAAAGT
TTTTCAAAGT TTTCTAAAAA GAACGTTTCA GGTGTAATTC TCTCGAAAGA CCTTGCAAAT
ACGTTAAATA TAAAACAAGG GGATTACGTA AACCTTGTTA CCGTTAATGG TATAAAGAGC
GTAAAAATCG ATGGCATCGG CTCTGAAGAA TTAAACTTTC GTGGAGAAAC GGGCATGACA
AATGGTAGTA TATTTATGCC TAAAGATTTA TTATTAAAAC TTAAAATATA CACATACAAA
GAACCAAATA CGGTGTTTAT TTCTTTGGGA AATGATATTA AAAAACATCC AGAAATCGCC
GAAAGTATCT CAAAAGAATT AAACCTTAGA ACCACTCCAA CAAAATACAA CTTAAAATAC
TCTCCACTAA ATAAGGTAAT AGGTTATTTG TTCTTAGGAT TTAGTGGTTT TGCACTATTA
AGTAGTTTTT TATTCATATC AAACTTTTTT GGAGTACTAG CAGAAGAAAG AAGAAAAATG
TTTGGAACGT TGAGAGCACT GGGAGCTTCA AAGTATAAAA CAGGTTTACT TTTGTTTTTA
GAGGGATTCT TTTACATCTT ATTTTCATCT TTGGTTGGTG CGTTATTTGG AATAGGCCTT
GGTAAATATC TCTTGGGATT AGTTAACAAA GCACCTGAAA TTATTTCTTC AAACACTGTA
ATTCCAGAAA AAATACCATT TTATATCACA TTAAAAACTA TAATTTTGGG TATCATAGTT
TCAATTATAG TCCCAATATT TATACTACTC ATACGTTCTA TATCTTTTGC AAAATTATCA
CCAGTTATCT TACTCTCAGA TGCAGAAATA CTTCCCAAAA AAAGGTTTTT CTACTTTGCA
ATGTTTGGAA TATTAATAAT CAGCATACCA TTTAATTTAT TTTACACTTT AATCTTCACT
ATTTTAATCA TCCCAATCTT TTTCAGAAAA AACTACATAC AGGCAATCTC AGGTACATTG
GCAATCTTAT TAGCGTTAAC AAAAATAGGA ACGGGAATTA ACTGGGATTA TCTTACACGT
TCTATCATAT TCCTACTAGG AAGTATATAC TTGGTATTTT CTATTTTACC ATTTATAAAA
TACCTACTTA GAAAGATATA CAACATACCC TCTATTTTAT CAATCTCATA TATAGAAAAA
CAGAAATTGA GAAATTACGT AATCTTTTTC GTATATACAT TAATCACCTT AATTATATTA
CTAACTGCAA CAATTCCAAC TAGTGTTTTT GATTACATAA ACCAAAAATT TGATACTGGT
ATTTTTGGCT ATAATTTTTT AATAATAGAA AATCCTTTAA AGAGCTTCTT TAAATTTTCA
TACTACACAG AAGATGAAAA GTTTAAATCT ATGTTTGAAA ACATATCTAA AATACAACTC
GTTAACGCCA AAATAGATAA CAAAAAAGAC TTAGTTATCA TCCTTGCTTC GGATGATATA
TATAAAAACC TTAAGATAGG TGACAAAAAT ATTTCCAAAA TGGAATTAAA AGAAGGTATT
GGAAATGAAA AGGTTTTTAA AGAAGGTACA TATAATATAA AAATAATGGG AATATTGCCA
GGTATTAGTG CAAAATTTAC AGAAAAATTC ACAGTTACTA ATACCTATGA TCCCAAAGAA
CTATTAGTAC CACTTGACGG ATTATTTGTA TACGACAAAA AAATTTCGGG AGCATTATCT
GGATATGCCG GAGTTATAAA AAAAGAATAT GCAGATAAGG CAAAACAAAT TGTATATGAA
AAATTTGATT CTCCTTTGTA CATCACAGAA GAATTGGATA AAATATTTTC TGGAATAAGG
TACTTTGTTA ACATAGCCAT TCAACTTTTC TACTTTGGAT TTATAAGCGG TTTTTCAGGA
CTAACTATAT TGAGCCTTAA AAACGTATAC GAAAGAAGAA TAATAATTGG TGCTTTAAAA
GCCATAGGTG TACACAAAAA GATTATATTC AAATTCTTCC TAACAGAAGC CTTTTTAATT
GTTTCCATTG CAATTCTCAC CGCACTTTTT ACAAATATGT TCATAATAAA CGATATTTCC
AAAATGATAA TTTCCGAAAT ACCTGATTTT AAAATGACAA TTCCCTGGTT GAAAATTATA
CTCATCATAT CAGGCGTATA TTTAATAACG GGAATTTTCA CCATTTATCC TGCAAACCTT
GCACAAAAGA TAAAAGCATC AGAAGCCATT AGAGTTTTTG ATTAA
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| Protein sequence | MVKIPVRNII KNWKTSLLVI LGSMIATMLV VGALSLNDSV DNWFAQKIKN NFGNIDIVAK
DKSDTFFFPR TLDVNKISQM LSYLKSTNKI KDYVFVELVS TRIKYGNNFA DVFAIGYDES
FSKFSKKNVS GVILSKDLAN TLNIKQGDYV NLVTVNGIKS VKIDGIGSEE LNFRGETGMT
NGSIFMPKDL LLKLKIYTYK EPNTVFISLG NDIKKHPEIA ESISKELNLR TTPTKYNLKY
SPLNKVIGYL FLGFSGFALL SSFLFISNFF GVLAEERRKM FGTLRALGAS KYKTGLLLFL
EGFFYILFSS LVGALFGIGL GKYLLGLVNK APEIISSNTV IPEKIPFYIT LKTIILGIIV
SIIVPIFILL IRSISFAKLS PVILLSDAEI LPKKRFFYFA MFGILIISIP FNLFYTLIFT
ILIIPIFFRK NYIQAISGTL AILLALTKIG TGINWDYLTR SIIFLLGSIY LVFSILPFIK
YLLRKIYNIP SILSISYIEK QKLRNYVIFF VYTLITLIIL LTATIPTSVF DYINQKFDTG
IFGYNFLIIE NPLKSFFKFS YYTEDEKFKS MFENISKIQL VNAKIDNKKD LVIILASDDI
YKNLKIGDKN ISKMELKEGI GNEKVFKEGT YNIKIMGILP GISAKFTEKF TVTNTYDPKE
LLVPLDGLFV YDKKISGALS GYAGVIKKEY ADKAKQIVYE KFDSPLYITE ELDKIFSGIR
YFVNIAIQLF YFGFISGFSG LTILSLKNVY ERRIIIGALK AIGVHKKIIF KFFLTEAFLI
VSIAILTALF TNMFIINDIS KMIISEIPDF KMTIPWLKII LIISGVYLIT GIFTIYPANL
AQKIKASEAI RVFD
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