| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0962 |
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| Symbol | rpsQ |
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| ID | 5297826 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | + |
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| Start bp | 993166 |
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| End bp | 993465 |
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| Gene Length | 300 bp |
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| Protein Length | 99 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 640769246 |
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| Product | 30S ribosomal protein S17 |
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| Protein accession | YP_001306208 |
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| Protein GI | 150020854 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0186] Ribosomal protein S17 |
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| TIGRFAM ID | [TIGR03635] 30S ribosomal protein S17 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00820919 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCAAAAA AAAGGCTTAT TGGAGAAGTT TTAAGCGATA AGATGGATAA AACAGTTGTA
GTTGCTGTAA GTACGTTGGT AAAACACCCG AGAGTGGGTA AATATATAAA AAGAACAAAA
AAATACTATG CTCATGATGA GAATAACGAG TGTAGAGTAG GGGATATTGT TGAAATCGTT
GAATCAAGAC CATTAAGCAA ACTTAAGAGA TGGAAAGTTG AAAGAATCGT GGAAAGATCT
GTTTTTGCGG AAAAAGCTCC AGAAGAAGAT TTGGAAGGAG GTAGTAATAA TGATAATTAA
|
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| Protein sequence | MPKKRLIGEV LSDKMDKTVV VAVSTLVKHP RVGKYIKRTK KYYAHDENNE CRVGDIVEIV
ESRPLSKLKR WKVERIVERS VFAEKAPEED LEGGSNNDN
|
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