| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0901 |
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| Symbol | |
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| ID | 5297975 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | - |
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| Start bp | 937563 |
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| End bp | 939494 |
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| Gene Length | 1932 bp |
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| Protein Length | 643 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 640769180 |
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| Product | putative DNA helicase |
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| Protein accession | YP_001306147 |
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| Protein GI | 150020793 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1112] Superfamily I DNA and RNA helicases and helicase subunits |
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| TIGRFAM ID | [TIGR00376] DNA helicase, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGAAGAAT ATATAAAAAA ATTAATACAA CTAGTAAAGC TTGAAAGAGA TGAGGAAATT
AAAAGAATGC AATGGGAAAT GAAAAATTTA ACAGGAAAAC AAAGAGAGAA CAAAGGAAGA
GCCATTCTAG ATCTTTCACC TAAAATAATA GGTGAAGAGC TTGGAATGTA TTTGGTAAAA
TTTGGAAGAA AAAAACAAAT TGAAACAGAA ATAGGAACAG GTGATGAGGT AATAATAAGC
AAAGGAAATC CAACAAAAAG TGATATAAAA GGTGTGGTTA CAGAAAGGGG AAAAAGATTT
ATAGTAGTAT CACTATCAAA TCTTTTACCA AAAGATTTTA AAAATGTAAG GATTGATCTT
TACGCAAGTG ATATAACCTA TAAACGACAA ATAGATAATT TAGAAAATAA CGATGTGAAA
AAAATACTAA AATACATTTT ATCTGACCCC AAAGTTGTTG ATAACGGAAC AGAAGAATTT
ACCCCTATTG ACAACAACCT AAATGAATAT CAAAAACTTG CCATATCAAA AGCTCTAAAA
AGTGAAGACT TCTCCCTTAT TCACGGACCA TTTGGAACTG GAAAAACAAG AACGCTTGCA
GAATATATAC TTCAAGAAGC AAAAAAAGGG AAAAAAATAC TTGTTACTGC AGATAGTAAC
TTAGCAGTGG ACAACTTGGT CGAAAGGTTA TCAGAAAGCA TTTCACATGT AAGAATAGGA
CATCCTTCTA GGATATCAAG TCATCTACTT AGCTCATCTC TTATGTATAA AATACAAACA
CACAATAAAT ACAAAGAAAT TGAAAAATTG AAAAAAACAT TCGAAAAATT AATACAAGAA
AGAGAAAGTT TTCAAAAACC AATTCCAAAA TGGAAAAGAG GATTAACTGA TAAACAAATA
TTAAAACTTG CAGAAAACAA CAAATCACAA AGAGGTATAC CTTTAAAAAT AATCAAAGAC
ATGGCAAAAT GGATTAAATT AAACGAAAAA ATAGAAACTA TAAAGGAAAA TATCTATAAA
ATAGAAGAAG AGATATCTAA AGATATTATC AATAATTCAA TGGTCGTATT TACAACAAAT
TCATCAGCAT ATATTGATAT TTTAAAGGAT TACGAATTCG ATGTGGTTGT AGTTGACGAA
GCAACCCAAT CAACTATTCC AAGTGTTTTA ATTCCTTTAT CTAAAGGGAA AAAATTTGTT
CTTGCGGGAG ATCACAAACA ACTACCTCCA ACTATTTTGT CCGAAAAGGC AAAAGAACTT
TCTACAACAC TATTTGAAAT GCTAATAAAA AAATACCCCC AAAAAAGTGA AATATTAAAA
ATACAATATC GCATGAATGA AAGACTCATG GAATTTCCCA ACAAGGAATT TTACAACAAC
CTTTTAATCT CTGGTGTAAA AAATATCACA TTAAAAGATC TAAACTTTAA AGGCAAAACC
CCTTTAACAA ATTACGAAAA TGTACTTATT TTTATCGATA CATCGTGCTT AGAAAATTAC
GAAGAACAAA GAAAGGATTC CACATCATAC ATAAACAAAC TGGAAGCAAA TGTTATAAAA
AACATTGTAG AAAGTTTTAT AAATGAAGGA GCAAAAAGGG AATGGATTGG TGTAATTTCT
CCATATGACG ATCAAGTTGA ACTGATAAGA AGTTTTGATC TCAAAATAGA CGTCAACACA
GTAGACGGTT TTCAGGGAAG GGAAAAGGAA ATAATTTTAA TATCTTTTGT AAGATCAAAC
AAAAACGGAG AACTTGGATT CTTAAACGAC CTAAGAAGAT TAAATGTTTC ATTAACCAGG
GCAAAAAGAA AACTTATATT AATAGGAAAT TCTAATACAC TAATAAAAAA TCAAACGTAC
AAAAGGTTGA TAAACTTTAT AAAAAAAGGA TACGGAGGGA TAAAATGGTT AGAAATATCA
TCTTTGATTT AG
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| Protein sequence | MEEYIKKLIQ LVKLERDEEI KRMQWEMKNL TGKQRENKGR AILDLSPKII GEELGMYLVK
FGRKKQIETE IGTGDEVIIS KGNPTKSDIK GVVTERGKRF IVVSLSNLLP KDFKNVRIDL
YASDITYKRQ IDNLENNDVK KILKYILSDP KVVDNGTEEF TPIDNNLNEY QKLAISKALK
SEDFSLIHGP FGTGKTRTLA EYILQEAKKG KKILVTADSN LAVDNLVERL SESISHVRIG
HPSRISSHLL SSSLMYKIQT HNKYKEIEKL KKTFEKLIQE RESFQKPIPK WKRGLTDKQI
LKLAENNKSQ RGIPLKIIKD MAKWIKLNEK IETIKENIYK IEEEISKDII NNSMVVFTTN
SSAYIDILKD YEFDVVVVDE ATQSTIPSVL IPLSKGKKFV LAGDHKQLPP TILSEKAKEL
STTLFEMLIK KYPQKSEILK IQYRMNERLM EFPNKEFYNN LLISGVKNIT LKDLNFKGKT
PLTNYENVLI FIDTSCLENY EEQRKDSTSY INKLEANVIK NIVESFINEG AKREWIGVIS
PYDDQVELIR SFDLKIDVNT VDGFQGREKE IILISFVRSN KNGELGFLND LRRLNVSLTR
AKRKLILIGN SNTLIKNQTY KRLINFIKKG YGGIKWLEIS SLI
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