Gene Tmel_0889 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_0889 
Symbol 
ID5298319 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp922929 
End bp926390 
Gene Length3462 bp 
Protein Length1153 aa 
Translation table11 
GC content28% 
IMG OID640769168 
Productchromosome segregation protein SMC 
Protein accessionYP_001306135 
Protein GI150020781 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG1196] Chromosome segregation ATPases 
TIGRFAM ID[TIGR02168] chromosome segregation protein SMC, common bacterial type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0518869 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGCATTT TACTTAAGGG AATCTTTTTG AAAGGTTTCA AATCTTTTGG AAAACCAACA 
AAAATTCCAA TATCCCCAAA TATAACGGCA ATTGTGGGAC CCAATGGTTC CGGAAAATCT
AACATTGTAG AGGCCATTCA ATGGGTTTTG GGAGAACATT CCCTAAAAAA CCTACGTGCA
TCTGAAAAAT TTGACATTAT ATTCAAAGGT AGTAAAAAGC TTTCATCTTC ACGGAGCGCT
TTTGTTGAAT TAAGTTTTAA TTTCAATGGA GAAGAATACA AAATTGCTAG AGAATTAACC
TCCTCAGGAG AAAATACATA TTACATAAAC GGTGAAAAAG CACGCCTTAA AGACATAACC
GCTTTATTTG GTGCAAATGG TATGGTATCA ATAATAGGAC AAGGAAAAAT AGACAAGATA
GCAATGTCAA CTCCAGATGA GTTAAAGAAA ATATTTGAAG ATGCTGCAGG TACATCTATA
TACATCGAAA GAAAAAAGGA AGCTCTCTCA AAACTTGCCG GTACTGAAAC AAATATTGAA
AGAATTAAGG ATGTTATTTA CGAAATAGAA AAAAACAAAA AAAGTCTATA CATCAAAGTT
AAAAAAGCGG AAAAATTCAA AGAGTACTCT CAAAAATTAG AAGAGATAAA GATAAGGTAT
TTTGGTGGAA TATATTATTT TGAAAAGAAA AAACTAGAAT CACTTGACAA AAAACACAAA
AATCTAAAAG CCCTTCTTAA AACCAAACTA AAATCTCTTG CCGAAACAGA AAGTAGATGG
AATATTTTAA GGGAAGAATT TAACAAAATA AACAAAAAGA TGGAAAATTT TACCTCCCTA
CTTGAAACTC AAAAAATACG TCAAAATCAG CTTCTTGAAC TTAAAAACTC CTATACAGAT
AGATTAAATG ATTTAAAAAA TATATACGTT GAAAAAATGA CAAAAATTGA TTCTCTAAAA
GATGAGCTAA AAAGAATTAA AGACCGTGAA CAGGAAATTT CATTAATCTT CGACTCCTTA
ATACTAGAAA TAAATAAACA AGAAACTGAG TTATCAAAAA TTGAAGAAGA AAGAAATACA
TTACTTTCGA AATACTCAAC AAAAGAAATG GAATACTTAA AGAAAAAAAA CGAATATGAT
GAAATTGAAA AAAATATACA TAAATTGGAA AACGAAAAAA AATCACTTTA TAATTCCGTA
AATGACCTAA AAGAACGAAT CTCAATGATA AAAGAACAAC TAGAGATAAA GTATGAAAGA
AAAAAAGATC TAGATAAAGA AATAAAGGAA TTATCCGAAA ATGCAGAAAA ATATGACCAA
AAAACAAAAA GCCTTCTTGA AGAAATTAAA ACAATTAAAG AAAAAACTGA TTCCTTAAAT
CAAGAAAGAG AATATTTAAA AGAAAACTTA GAAAAACTAA TTCACAGAAA AAAAGAAATA
CAATCTGAAA TATCGATAAT CAAAAAAAAT ATCTCAGAAT ACCAAGGTTT TTCTTTTGCA
ATAAAGAAAA TATTTGAAAA CAAAGAAAAA TTTCCGGGAA TAATAGATGT AGTTGCAAAT
ATAATTGATG TAGACAAAAA GTATGTAGAA GCGATCGAAG CATTATTAGG TGGAAGAATG
CAACATATAG TTGTGGAAAA TTCAGAAGTT GCAAAAAAAA TATTACAATT TGCAAAAGAA
CAAAAAATAG GTAGAATAAC AATTATTCCA CTTGATTTAA TACGTATATT TTCGAAAAAT
TCCATTCTTC CAAAAAATGC TATTTTTGCA AAGAATATAG TAACCATCAA AGTAGATGAA
AAAGAAAAAC TATTAAATTT TCTTTTTGGT AATGACATAA TAGTTGAAAA TATAGATTTA
GCAGTTGAAA TAAAGAAAAA ATACGACTTT AGGATTGCAA CTTTAGACGG AGAATTAATT
AGCAATTCAG GAACAATAAC AGGTGGAAAA TCTGAACATA TATCACCACT ATCGAGAAAA
AAACAACTTG AAAAATTGAA AGAAGAGTTG GAAAATATTT TCCAACTTGA AGAAAAAACT
AGTGCAAAAA TTTCTCAATT AAAAGATGAA ATAAACGAAC TTAGAAAATA CAATGAAGTA
ATTAATTCTG AGTTTTTAGA AATAAACAGT AAAAGTTCAT CTGCAAAAAG GATGCTTCAA
GAACTTGTTA AATCTCAAAA TGAACTAAAT AAAGAAATTA CAAACTTAGA AAAAATACTA
AGTAATACTA CCTTAAGACT AAGCGGAGTG GAAGAAAGAA TAAATATAAT AGATGATGAA
ATAAAAAACT CAACCTATCT TTTAAAAACA TTAAAATTAA CATTAGAAAA CACAAATAAG
GAAATGTACG AAGATAAAGA AAAAATAGAA AAGATAAATG AATCGTATCT AGAGCTTCAA
TCTAACTTAA GAGGTTTAAA CGAAAGAAAA ATACAATACG AAGGAGAATT GAAAAGACTA
TCAAATAGAA AAGATGAAAT AGAAATTGAA ATTTCTACAA TTACAAATGA AACAAAATAC
GAAAAGGAAA AAATAGAAGA ACTTGAAAAC TCAATAGAAG AAATAGAAAA AGAACTAAAA
ACGCTAAAAG AAGAAACAGA AGCACTTTTC AAAAATATGA ACGAAGATAA AGACGGAAAA
AATAACAAGC TAAAAGAACT TGAAACACTA GAGAGTGAAA TGGAAAAGCT AAGAACAGAA
ACAGAAGAAT TAAGAGAAGA AATCCATTCA ACAGAACTAG AATTACAAAA AGTAAGACTA
AAAATAGAGA ACATAGACGA AAAATACAGG AAAGAAGTTA AACTTTCGAG TGAAGAAATT
GATATGTTAA AAAAAGAAAT GGAAACTATA GAGACAAAAC TAAAATACAT TGGACCAGTT
GATTTTGAAG CAGAAGAAGA ATACCAAGAA GTTTCCCAAA AATTAGAAAC TCTTGAAAAA
CAAAAAAAAG ATCTAGAAGA TGCAAAACAA AAAATAATAG AACTAATCGA AAAAACAGAT
GAAGAAGCAA CTCAAATATT CATGAACACA TTTAATATTA TTAAAAAAAC ATTTAAAAAT
TACATAAAAG AACTGTTTTT TGGTGGAAAA GGTGATATAA GGTTGCTTGA TAAAGAAAAC
ATCTTAGAAA GTGGTATTGA AATAATTATA ACCAAAGGAG ATGGAAGATC TCAAAAACTT
CAACTTTTAT CCGGCGGCGA AAAAGCGCTT GTGGGTCTTG CTCTTCTCAT GTCACTTCTT
CAAGCACAAC CAAGTGCTTT TTATGTACTT GATGAACCAG ATGCTCCATT AGATGAATTT
AACGCAGAAC GTTTTAAAAT GTTACTAAAA AATTCGAAAG CACAAATAAT TATCATTACT
CATAAAAAAA TTGTCATGGA GGCGGCGGAT ATAATGGTTG GTATTACAAA AACAGATGAT
ATCTCAACAA TAGTACCAGT AAGAATGGAG GAGGTAGTAT GA
 
Protein sequence
MSILLKGIFL KGFKSFGKPT KIPISPNITA IVGPNGSGKS NIVEAIQWVL GEHSLKNLRA 
SEKFDIIFKG SKKLSSSRSA FVELSFNFNG EEYKIARELT SSGENTYYIN GEKARLKDIT
ALFGANGMVS IIGQGKIDKI AMSTPDELKK IFEDAAGTSI YIERKKEALS KLAGTETNIE
RIKDVIYEIE KNKKSLYIKV KKAEKFKEYS QKLEEIKIRY FGGIYYFEKK KLESLDKKHK
NLKALLKTKL KSLAETESRW NILREEFNKI NKKMENFTSL LETQKIRQNQ LLELKNSYTD
RLNDLKNIYV EKMTKIDSLK DELKRIKDRE QEISLIFDSL ILEINKQETE LSKIEEERNT
LLSKYSTKEM EYLKKKNEYD EIEKNIHKLE NEKKSLYNSV NDLKERISMI KEQLEIKYER
KKDLDKEIKE LSENAEKYDQ KTKSLLEEIK TIKEKTDSLN QEREYLKENL EKLIHRKKEI
QSEISIIKKN ISEYQGFSFA IKKIFENKEK FPGIIDVVAN IIDVDKKYVE AIEALLGGRM
QHIVVENSEV AKKILQFAKE QKIGRITIIP LDLIRIFSKN SILPKNAIFA KNIVTIKVDE
KEKLLNFLFG NDIIVENIDL AVEIKKKYDF RIATLDGELI SNSGTITGGK SEHISPLSRK
KQLEKLKEEL ENIFQLEEKT SAKISQLKDE INELRKYNEV INSEFLEINS KSSSAKRMLQ
ELVKSQNELN KEITNLEKIL SNTTLRLSGV EERINIIDDE IKNSTYLLKT LKLTLENTNK
EMYEDKEKIE KINESYLELQ SNLRGLNERK IQYEGELKRL SNRKDEIEIE ISTITNETKY
EKEKIEELEN SIEEIEKELK TLKEETEALF KNMNEDKDGK NNKLKELETL ESEMEKLRTE
TEELREEIHS TELELQKVRL KIENIDEKYR KEVKLSSEEI DMLKKEMETI ETKLKYIGPV
DFEAEEEYQE VSQKLETLEK QKKDLEDAKQ KIIELIEKTD EEATQIFMNT FNIIKKTFKN
YIKELFFGGK GDIRLLDKEN ILESGIEIII TKGDGRSQKL QLLSGGEKAL VGLALLMSLL
QAQPSAFYVL DEPDAPLDEF NAERFKMLLK NSKAQIIIIT HKKIVMEAAD IMVGITKTDD
ISTIVPVRME EVV