Gene Tmel_0886 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_0886 
Symbol 
ID5298162 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand- 
Start bp920569 
End bp921279 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content29% 
IMG OID640769165 
Producthypothetical protein 
Protein accessionYP_001306132 
Protein GI150020778 
COG category[S] Function unknown 
COG ID[COG1434] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.351499 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTTATA TATACAAAAC TGTAGGCAGT ATGGTACAAT TTCCAGGAAT ATTAATTCTT 
TTATTTTTTA TAATTTCCAT ATACTTTTTA ATAAAAAAGC GCCATATTTG GCGATTTTTT 
ATTATTCTTT CAATTACACT TTATGTTATT TCAACCCCCA TATTCAACTT CTTTATTTCA 
AAACTATTTA TAGTAGATAC AAAACCAATA CCAAAAGATG GTACAATAGT AGTATTAGGT 
GGTGGAATAG TAAACTATGC AAATAATATT GAGATTGGCA CACACACCTT AAAACGACTT 
TTAAAAGGCT GGGAAATCTA CAAAGAAAAA AGGTTAAAAA TAGTAGTAGC AGGCGGTGTG 
ATAGGTGACG GAATAAGAGA AGCTGATGTA ATGAAAGATT TTTTAATAAA ACTTGGCGTT 
TCAAAAGACG ATATTATTAC AGAAAATACA TCTAGAACCA CAAAAGAAAA TGCTAAAAAT 
GTCTCAAAAA TCACAAAAGA TCCAAATATA ATCCTTGTAA CTTCCTTTCT TCATATGAAA 
AGGGCTAAAA TGTTATTTGA AAAATACACA CAAAGCAATA TAATTCCAGT TGTGTGTGAT 
TATCCTATAG ACCTTAGAAA AAACTTTCTA GATTTTCTCC CTTCTCCACG AGGTATATAT 
ACATTTTCGT TAATCACACA TGAATTTCTT GGAATATTAA AAGGGGGATA A
 
Protein sequence
MIYIYKTVGS MVQFPGILIL LFFIISIYFL IKKRHIWRFF IILSITLYVI STPIFNFFIS 
KLFIVDTKPI PKDGTIVVLG GGIVNYANNI EIGTHTLKRL LKGWEIYKEK RLKIVVAGGV 
IGDGIREADV MKDFLIKLGV SKDDIITENT SRTTKENAKN VSKITKDPNI ILVTSFLHMK 
RAKMLFEKYT QSNIIPVVCD YPIDLRKNFL DFLPSPRGIY TFSLITHEFL GILKGG