Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmel_0840 |
Symbol | |
ID | 5298349 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermosipho melanesiensis BI429 |
Kingdom | Bacteria |
Replicon accession | NC_009616 |
Strand | + |
Start bp | 879255 |
End bp | 879950 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 640769117 |
Product | ABC transporter related |
Protein accession | YP_001306086 |
Protein GI | 150020732 |
COG category | [R] General function prediction only |
COG ID | [COG1137] ABC-type (unclassified) transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAATAT ACTGTAGGGG TATAAAAAAG AAATTTGGAA GGAACCAAGT TTTAAATGGA GTAGATTTAT ATGTAAATAC AGGTGAAGTA GTAGGCTTGC TGGGACCAAA TGGTTCTGGC AAGACTACTT TATTCAATAT AATATTAGGT GTTGTAATTC CAACTTATGG AAGAGTTTTT CTCGATGAGA AAGATATAAC AAAGATGCCA ATACACAAAC GTGCAAGACT TGGAATTACT TATCTTCAAC AAGAAACTTC TGTTTTTAGA CAACTTACCG TTGAGAATAA CTTGAAGTTG GTTTTGGAAT ATTACGATAA GAATTTTGAA AAAATTCCAA AATTATTGGA AAATTTCGGA CTATACGATT TGAGGAAACA GATGGCCTTT AACCTCTCAG GTGGAGAAAA AAGAAGACTA GAACTTGCAC GTATGATGAC TCTTTCGCCA AAATTTTTAT TGTTAGATGA ACCGTTTGTG GGAATTGATC CCAAAACTGT TAAAGAAATA CAAAAAATGG TGATTGAATT AAAAAAAATG GGGCTGGGGA TAATAATTAC TGATCATAGT GTGGAGGCAT TGATGGATAT TGTAGATAGA CTTTATGTTA TCCACAAAGG TGATATAATT AAGAGTGGAG AACCAGAGAG TGTTTTGAAT GATGAAACTG TGAAAAAAGT GTATTTGGGG GGATAG
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Protein sequence | MRIYCRGIKK KFGRNQVLNG VDLYVNTGEV VGLLGPNGSG KTTLFNIILG VVIPTYGRVF LDEKDITKMP IHKRARLGIT YLQQETSVFR QLTVENNLKL VLEYYDKNFE KIPKLLENFG LYDLRKQMAF NLSGGEKRRL ELARMMTLSP KFLLLDEPFV GIDPKTVKEI QKMVIELKKM GLGIIITDHS VEALMDIVDR LYVIHKGDII KSGEPESVLN DETVKKVYLG G
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