Gene Tmel_0839 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_0839 
Symbol 
ID5298338 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand+ 
Start bp878773 
End bp879258 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content32% 
IMG OID640769116 
Productouter membrane chaperone Skp (OmpH) 
Protein accessionYP_001306085 
Protein GI150020731 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2825] Outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAAAAG TAGGTGTTTT GGTAGTATCC ATAGGTATAT TGTTATCATT TGTGCTTCTC 
TTTGCAAGTG GGGATACAAA TCAAGGTCCA AAATTTGCTT ACATTGATTC GACAAAGGTA 
CTTCAATCTT ACAGTAAATT TATAACCCTT CAAGCAAAAT ATCAAGAAGA TGCGGCTTTT 
TATCAAAAGA AGCTCAATGA ACTTGCTGCG GAGATAAATT CCATGAAGGA ACAGGGGGTA 
AGTGAGCAGG AAATAAACAA AAAAATAGCA GAATATTCAC AAAAACAACA ACAATATTCT 
CAAATGTTGA ATAATGAGTA TCAACCTAAG TTTTCACAAA TTGAACAGGA AATATTGGAA 
AAAATAGCAC AATATGCTGA AATAATGGGA TATGATTTTG TGTTTAATAG TAAGTCTATG 
GCATATGGTA ATTCAAAGTA CGATATTACA GCACAATTTA TAGAATACCT AAACTCTGCA 
CAATGA
 
Protein sequence
MRKVGVLVVS IGILLSFVLL FASGDTNQGP KFAYIDSTKV LQSYSKFITL QAKYQEDAAF 
YQKKLNELAA EINSMKEQGV SEQEINKKIA EYSQKQQQYS QMLNNEYQPK FSQIEQEILE 
KIAQYAEIMG YDFVFNSKSM AYGNSKYDIT AQFIEYLNSA Q