| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0826 |
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| Symbol | |
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| ID | 5298193 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | - |
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| Start bp | 867478 |
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| End bp | 868149 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 27% |
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| IMG OID | 640769103 |
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| Product | sugar fermentation stimulation protein |
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| Protein accession | YP_001306072 |
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| Protein GI | 150020718 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1489] DNA-binding protein, stimulates sugar fermentation |
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| TIGRFAM ID | [TIGR00230] sugar fermentation stimulation protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000350314 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATGAATA TAATAAAAAT TGATAATACT CAAAGTGGTA TTTTTCTTGA AAGAATAAAC
AAATACCTTG CAAAAATATA TTTAAACGAG AATGTAGTAG ATGTACATGT TCATGATCCA
GGTAGACTTA AAGAATTATT ATTCAAAAAC AACAAAGTTT TAGTTAAAAA AGTAAATTCA
ACCAATAGAA AAACAAAATA CGATTTGATT GCAGCAAAAA AGGAAAAAGA ATACGTTTTG
GTACATTCAA TGTATCATAG GTATATAGCC GAAAAAATAT TAAGAAAAAA ATACACACAT
TTAAAAGCGG AAGTAAAATA CAAAAATAGT AGAATAGATT TTCTAGCAGA AGATAAATTT
TGGATTGAAA TAAAAGGATG TACCCTATCC GATGGAAATA TGGCAAGATT TCCAGACGCT
CCTACCAAAC GCGGGACAAA ACATTTAGAA GACTTGATGG AATTAAAAAA GCAAGGATTT
GACACTTTTA TTTATTTTTT AATTTTTGCA AATGCAAATT ATTTTTCTCC TAATTACGAA
ACAGACCTAT CTTTTTCAAA AAAACTTGAA GAAGCATATA GCTTAGGTGT TAAAATAGTT
CCTCTGTTAT TCTCATTAGA AAACAATTGG ATAGTTTTTA AAAGGGAAAT CCAACTAATA
TTTGATGGTT GA
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| Protein sequence | MMNIIKIDNT QSGIFLERIN KYLAKIYLNE NVVDVHVHDP GRLKELLFKN NKVLVKKVNS
TNRKTKYDLI AAKKEKEYVL VHSMYHRYIA EKILRKKYTH LKAEVKYKNS RIDFLAEDKF
WIEIKGCTLS DGNMARFPDA PTKRGTKHLE DLMELKKQGF DTFIYFLIFA NANYFSPNYE
TDLSFSKKLE EAYSLGVKIV PLLFSLENNW IVFKREIQLI FDG
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