| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0803 |
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| Symbol | |
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| ID | 5298102 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | - |
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| Start bp | 840893 |
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| End bp | 844381 |
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| Gene Length | 3489 bp |
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| Protein Length | 1162 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 640769080 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_001306049 |
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| Protein GI | 150020695 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1449] Alpha-amylase/alpha-mannosidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.64096 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAG TTGTTTTTAT TTTACTCATT TTTTCAATTT TTAGTTTTTC TTCTGTATTT
GTTGAAAACG GTGAAGTTAT TTTCACATTT AAAAAAGCAT TGGATGCAAA GGTTGTTTAT
CTTGCAGGAA CTTTTAACAA CTGGTCACCA AACTCTTTAG CAATGGAAAA AGAGGGAAAT
GTATGGAAAA TTTCTTTGAA ACTAGAGCCA GGTACATATC AGTACAAATA TGTAATAGAA
GGGACAAATT GGAAAGAAGA TCCAGAAGCT CCTGGTTATG TTGACGATGG ATTTGGTGGA
AAAAATGGTA TTTTTACTTT GGCAAAAAAA GATGGAGAGT TAATAATACT GAAGAGTGAA
ACGAAAAAAA GTGAAAGTAG TTATGAAAAA AATGAAAAAT TTGATAAGGG TAAAATGTTT
ATTGATGAAG AAGGTTATGT GGTGATAAGG TTTGAGTATA AAGGAGCAGA TTACGTTACA
ATTGCAGGTA ATTTTAACAA TTGGAATGCA GAAGACACAG AATGTTATGA AATTGATGAT
GGCATATGGG AAGCGGTTTT AGAACTTGAG GAAGGGGATT ATCAATATAA ATTTGTCGTT
AATGGAAAAG ATTGGGTAAC CGATCCTAAT GCTCTGGCAT TTGTAGATGA TGGATTTGGC
GGAAAAAACG GCTTTTTCCA AGTATTCAAA GTTAATGGAA AACTAACAAT AGGTTTAAAA
GAAGAAAGCA CTAAAGCCAA ACCTTTGAAT GTAGCTATAA TTTGGCATCA TCATCAACCA
TTGTACAAAA TTCCTGGAGA AGAACAATTT ATGATGCCAT GGGTTAGAAC TCATGGAGTA
AATGATTATC CTTACATGGC AGATTTAGTA AAATATCTAA AAACAGGAAA AGTCACTTTT
AATCTTGTTC CAAGTTTGCT TTTACAAATA GAAGATTATC TGAAAGGGCA ATTAGATGAA
TACCAAAGAT TATCTTTAAA CGAAAATCTC ACAAAACAAG AAAAACAATT TCTTATAAAT
CACTTTTTTG ATATTAATCC ACAATTTGTC AACGCACATG AAAGGTATAA AGAGTTGATG
GAAAAGAAGG TTTCAGGAGA AGAATTCACA GATCAAGATT TACTAGACTT AAAGGTCTGT
TGGAATCTCT ATTGGATAAA TATTGAATAT ATAAATCAAG ATGAAAGATT AAAATCTTTG
ACCAGCAAAA AACACTACAC AAAAGAAGAT TTAATATACG TACTTGATTA TCATAAAAAG
CTTTTAAGTG AAATTGTTGA AAAATACAAA ACGCTTTGGG ATAATGACAA AGTAGAACTA
ATTACCACTC CATTTTACCA CCCCATATTA CCAATATTAG TTGACATGGG TTGGAAAGAT
GATGCAGTTA TACAAATAAA GGAAGGTTTA TCCTATTTTG AAAAAATCTT TGGAAAAAGA
CCTGTTGGAA TGTGGCCTTC TGAACAAGCT GTATCTCAAG AAGTACTGGA AATCATAGCG
GAAAATAACA TAAAGTGGAT TGTAACAGAT AAACAAATTT TACAAAAATC TGGAATTGAT
ATTGGAAAAG TGGAAAATTT CTTAAGACCT TACAAGGTAA AGACTTCCAA AGGAGATGTA
GTCGTATTTT TCAGAGATAC AGACCTATCA GATAGAATTG GCTTTAAATA TTCTCAAATG
CATGCAGAAA GTGCCGTAAA AGATTTTATA GAAACACTAC ATCAGTACCA AAAGTTAAAC
AAAGACGGCA ACCTTGTAAT TACCATAGCA TTAGATGGCG AAAATGCATG GGAACATTAT
CCAAATAACG GAAATGATTT TAGAAAACTA CTTTACAAAA AACTATCAGA AGATCCTTTG
ATAAACCTTG TAACCCTCTC AGAATACATT GAAAAATTTG GTGTAAAAAA TACTCTTGAT
AAAATTGCAA AAGGCTCTTG GGTATCTGGT TCATTGGATA CTTGGATAGG TGAAACCGAA
GAAAATCAAG CATGGAAAAG GTTGAAAGAT GCAAGGAAAG TTCTTCTGGA AAAAGGCCTG
GATGACATTT CCAAACATCT TTTAATGGCA GCGGAGGGTA GTGATTGGTT CTGGTGGTAC
GGAACAGACC AGGATGCAGG TAACAATGAA TACCTTTTCG ATATGCAATT TAAAAAATTA
TTGATTGAAA TGTACAAAAA AGCAGGGAAA GTTCCACCAA GTTATCTTTA TATAGTAAAC
AAAAGACCTG TAAATCCAGA CAAAGGCGTA ATTAAGAAGG TTGAATACAA AATTGATGGA
ATAAAAGAAA ATGACATAGC TGTTTTTGAA GATACTTTGG ATGGTAATTT ACTCAACAAC
GTTTTTGTCG CACGTGGAGA TTCTGGTATC TATGTAGGTG TAGAACTTAA TAACAGTGCA
AAAAGTCTAT TGGGAAAAGA TATAAAAGTA GAAGTTTACG TTGAAAGCCC TACGGCAAAA
ACATTTAACG CCAAAACCTA TTACTCAAAC GAAAACATTA CTTTTTTGGG CTTTCCTCTA
TCTCATAGAT TTGTGGTAAA CCTAAAAACA TGGAACAAAA GACCAAAAGT AAGTTTCTAT
AAGGCAAATG GTAGTGATAA ATGGATACTT ACAACTGGAA ATATTTCAGG AGTTATTGAT
GATATCGTTG AAATTGAAAT ACCATACGAT CTGATAAATG TAAAATCTGG TCAAGATTTT
AATCTTGCAG TAGTTGTGTC AGAAAACAGG CAAGATAAAG ATTTTGGACC TAATAACGGT
CCAATAAAGG TTATTATTCC GGCGGCGATT TCCGGAAATG TAATTAAAAT ATTTGAAGAT
CCATTGGGAG ATGAATATGG ACCTGGAAGT TATGTCTATC CAAAAGATCA AGCATTCAAA
CCATTTAAAG GGTTATTTGA TATGATAAAA GTAGTTGTTC TAGAAAATGA AAAATCGTTT
ATATTCCAAA TAAAGTTTGC TGAAATGACA AACCCCTGGG GTGCACCAAA AGGTTTTTCT
CACCAACTTA TAAATATATA CCTCGATACC AAGGAAGGAG GAAGAACAGA TACCTATAAA
GAAGGGGCAA GGGTTGCATT TGACCCACAG CATTCTTGGG ATTATTTTAT AAAGGTTGCA
GGATGGCCAT CTTATGGACA ATTTTTCGCA ACAAGTGATG GTAATGAAAT ATCAGATGCG
GTAAGAGTTG AAGCAAATCC AGGCAAAAAA GTTATTAATG TTATCCTGTT GAAGAAATAC
ATTAATATTG AAACAGGCAT ATACGCTTAT ATCTTAGTAG GAAGCCAAGA TGGATATGGC
CCAGATAACT TTAGACCTGT TACCCCAGAA CCTTCTCAAT GGACTTTGGG AGGATATCCA
AAAGATTCCA ATGATATGGC TCCTTATGTT TTGGATATTT TAGTGGAAAG TGGTAAAGAT
CAAAGAGAAA TTCTTTCTTC GTTTACAAAA ACAAATTATG CAGTATTAAA ACCTGTTAAG
ATTAAATAA
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| Protein sequence | MKKVVFILLI FSIFSFSSVF VENGEVIFTF KKALDAKVVY LAGTFNNWSP NSLAMEKEGN
VWKISLKLEP GTYQYKYVIE GTNWKEDPEA PGYVDDGFGG KNGIFTLAKK DGELIILKSE
TKKSESSYEK NEKFDKGKMF IDEEGYVVIR FEYKGADYVT IAGNFNNWNA EDTECYEIDD
GIWEAVLELE EGDYQYKFVV NGKDWVTDPN ALAFVDDGFG GKNGFFQVFK VNGKLTIGLK
EESTKAKPLN VAIIWHHHQP LYKIPGEEQF MMPWVRTHGV NDYPYMADLV KYLKTGKVTF
NLVPSLLLQI EDYLKGQLDE YQRLSLNENL TKQEKQFLIN HFFDINPQFV NAHERYKELM
EKKVSGEEFT DQDLLDLKVC WNLYWINIEY INQDERLKSL TSKKHYTKED LIYVLDYHKK
LLSEIVEKYK TLWDNDKVEL ITTPFYHPIL PILVDMGWKD DAVIQIKEGL SYFEKIFGKR
PVGMWPSEQA VSQEVLEIIA ENNIKWIVTD KQILQKSGID IGKVENFLRP YKVKTSKGDV
VVFFRDTDLS DRIGFKYSQM HAESAVKDFI ETLHQYQKLN KDGNLVITIA LDGENAWEHY
PNNGNDFRKL LYKKLSEDPL INLVTLSEYI EKFGVKNTLD KIAKGSWVSG SLDTWIGETE
ENQAWKRLKD ARKVLLEKGL DDISKHLLMA AEGSDWFWWY GTDQDAGNNE YLFDMQFKKL
LIEMYKKAGK VPPSYLYIVN KRPVNPDKGV IKKVEYKIDG IKENDIAVFE DTLDGNLLNN
VFVARGDSGI YVGVELNNSA KSLLGKDIKV EVYVESPTAK TFNAKTYYSN ENITFLGFPL
SHRFVVNLKT WNKRPKVSFY KANGSDKWIL TTGNISGVID DIVEIEIPYD LINVKSGQDF
NLAVVVSENR QDKDFGPNNG PIKVIIPAAI SGNVIKIFED PLGDEYGPGS YVYPKDQAFK
PFKGLFDMIK VVVLENEKSF IFQIKFAEMT NPWGAPKGFS HQLINIYLDT KEGGRTDTYK
EGARVAFDPQ HSWDYFIKVA GWPSYGQFFA TSDGNEISDA VRVEANPGKK VINVILLKKY
INIETGIYAY ILVGSQDGYG PDNFRPVTPE PSQWTLGGYP KDSNDMAPYV LDILVESGKD
QREILSSFTK TNYAVLKPVK IK
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