Gene Tmel_0710 details

Gene Information

• Locus tag: Tmel_0710
• ID: 5297750
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermosipho melanesiensis BI429
• Kingdom: Bacteria
• Replicon accession: NC_009616
• Strand: +
• Start bp: 747201
• End bp: 747647
• Gene Length: 447 bp
• Protein Length: 148 aa
• Translation table: 11
• GC content: 29%
• IMG OID: 640768990
• Product: siroheme synthase
• Protein accession: YP_001305959
• Protein GI: 150020605
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG1648] Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain)
• TIGRFAM ID: [TIGR01470] siroheme synthase, N-terminal domain

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTTTCA TACCAATAAT GTTGAACTTA ACGGGAAAAA AATGTCTTGT AATTGGTGGG 
GGAAAAGTTG CCGCAAGAAA ACTAAAATAC TTTGTAAATA AAGCCGATGT CACAGTTATA 
GCGAAAAATA TATCAAAAGA AATTAAAAAC ACGAAAGGAG TAATGTATAT AGAAAAAGAG 
TATTCACCAG GTGATTTAGA AGGATTTGAT GTTGTAATAA TCACAACGAA CGACAAAAAA 
CTAAACGAAA AGATCCATCA TGAAGCAAAA AAGAAGAAGA TACTTACAAA TAATGCAACA 
AGTAAAATTT TTTGTGAATT TATTATGCCT GCAATAATCG AATACAAAGG ATACACTATT 
TCAATTTCCA CAAACGGAGA AAACCCAAAA AAAGTAAAAC AATTAAAAGA AAAAATAAAA 
AAATTCTTGG AGGGATTAGA TGTTTGA 

 

Protein sequence

MAFIPIMLNL TGKKCLVIGG GKVAARKLKY FVNKADVTVI AKNISKEIKN TKGVMYIEKE 
YSPGDLEGFD VVIITTNDKK LNEKIHHEAK KKKILTNNAT SKIFCEFIMP AIIEYKGYTI 
SISTNGENPK KVKQLKEKIK KFLEGLDV