Gene Tmel_0677 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_0677 
Symbol 
ID5297084 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp714844 
End bp715563 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content31% 
IMG OID640768957 
ProductABC-type cobalamin/Fe3+-siderophores transport systems ATPase components-like protein 
Protein accessionYP_001305926 
Protein GI150020572 
COG category[H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAAAG CAAAAAAGAA AAATCTTGAA GTGATAGATT TCTCTGGATA TTCTAACAAT 
ATCCCGCTTT TTGAAAATAT CAGTTTTTCA TTGGATGTAG GTAAGATACT TGTAATTTAC
GGCCCGCGTG GTTCCTCCAA ATCTGCGCTT CTTCGTTCAT TTTCTCGCCT AAATGAAGAG
GTATACGATG ATATAAAATA CGATGGAACT GTAAATGTAT GTGGAAAGAA TTTATTTGAT
TACGACGTTA AAGAATTGAG AAATGATGTT TTATATATAG ATACAAACTT TTTTGAAGCT
TTAGATTATT TGAAGTTTGG GGAATTTTTG GAGCTTGCAA CCAATGAGGA GTTGCTTTCT
TTTGAGAATT ATATTTCCAT ATTAGATGAT TTTGGTGTTT TAAAGACTCT TTCGAAAGGA
TTTGAAACTA AACTTTCAGA TTTTTACGTT TTAGAGAAGA TATTAACACT TCTTTTTGTT
GGTTATTTAA AAAATTCAAA AATAGTTATT TTAGATTGTA TTTTAGATCA CTTAGATGAT
GACCACTTAA AAGTTGTTTC CAAAATCTTG AAAAAAAACA TGGTTTCCGC CAGAAAAACC
CTAATAGTTG CCACACGCTT TTTTAAGCGC TTCCTTCCTA TTGCAGATTT GTTTATTTCT
CTAAAAAGTG GTAAAATTGA ATTTGTAGGT GAGCCTAAAG ATTATACAAT TGTGAGGTGA
 
Protein sequence
MEKAKKKNLE VIDFSGYSNN IPLFENISFS LDVGKILVIY GPRGSSKSAL LRSFSRLNEE 
VYDDIKYDGT VNVCGKNLFD YDVKELRNDV LYIDTNFFEA LDYLKFGEFL ELATNEELLS
FENYISILDD FGVLKTLSKG FETKLSDFYV LEKILTLLFV GYLKNSKIVI LDCILDHLDD
DHLKVVSKIL KKNMVSARKT LIVATRFFKR FLPIADLFIS LKSGKIEFVG EPKDYTIVR