Gene Tmel_0598 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_0598 
Symbol 
ID5296939 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp631628 
End bp632719 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content32% 
IMG OID640768860 
Productisoaspartyl dipeptidase 
Protein accessionYP_001305850 
Protein GI150020496 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1001] Adenine deaminase 
TIGRFAM ID[TIGR01975] isoaspartyl dipeptidase IadA 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGATATATA CGCTTAAAGG AGGAAAAGTA TTTTCTCCAG ATTATTTAGG AGAGAAAGAC 
ATTTTAATAG CAAATGACAA GATTGAATTA CTTGATGATA CTATAATCTG CCCTTATGGT
GAAATTTATG ATTTAACAGG TAAAATAGTT GTTCCAGGGT TTATTGATGC GCATGTTCAT
ATTGCTGGTG GAGGAGGTGA AGGTGGATTT GTTACAAGGA CTCCTGAAAT AACTTTTGAT
GAAATAGTTA ATTCTGGAAT AACAACGATA GTAGGTTGTT TGGGGACAGA TGATATTACA
AGGAATTTAG AAGGGTTATA TGCTAAGGCA AAAGCACTTG AATTGCGGGG AATTACTAGT
TATATATATA CAGGTTCATA TTCGGTGCCA CCTGTAACTT TTACAGGGAG TATAAAGAAA
GATTTAGTTT TAATAGATAA AGTTATTGGC GTTGGTGAAA TTGCAATATC AGATCATAGA
TCTTCACAAC CATCTTTTGA AGAGATAAAA AAGATAGTTG CAAAAGCGAG GGTAGGAGGA
TTAATTTCAG GAAAAGCTGG AGTTGTAAAT TTTCATGTTG GTTCTGGTAG TTGCAAGATA
GAATATTTAT TGAACATATT AAAAGAGAAT GAAATCCCTG CAAAACATAT GTATCCTACA
CATATGGGAA GGTCAGATGA ACTATTCTCT CAAGGAATAT TATTTGCTAA AAAAGGTGGA
TTTATAGATT TAACTGCCTC TATAGATATG GTAAAGTATC TTGAGATAGG AATTTATGAG
AATATATACT CAAATATGAC TATGACATCA GATGGTCAGG GAAGTTTACC AAAGTTTGGT
GAAGATGGAA ATCTTATAGA GTTAAATGTT GGAAGTGTTT CAGTTTTGTT TGAAACAGTC
AGATATGCTG CTAATAAAGG TTTGAATTTT GAAAAACTTT TAAAAATGAT TACGGAAAAT
CCTGCAAAAG TTTTAGGTTT GAAAAATAAA GGAAGAATAA AATCCGGAAA TGATGCGGAT
ATAGTAATCT TAAATGAAGA TATGGAAATA GAAGGAGTAA TAGCTAAAGG AAAATTTGTA
AGGAGGGGAT AA
 
Protein sequence
MIYTLKGGKV FSPDYLGEKD ILIANDKIEL LDDTIICPYG EIYDLTGKIV VPGFIDAHVH 
IAGGGGEGGF VTRTPEITFD EIVNSGITTI VGCLGTDDIT RNLEGLYAKA KALELRGITS
YIYTGSYSVP PVTFTGSIKK DLVLIDKVIG VGEIAISDHR SSQPSFEEIK KIVAKARVGG
LISGKAGVVN FHVGSGSCKI EYLLNILKEN EIPAKHMYPT HMGRSDELFS QGILFAKKGG
FIDLTASIDM VKYLEIGIYE NIYSNMTMTS DGQGSLPKFG EDGNLIELNV GSVSVLFETV
RYAANKGLNF EKLLKMITEN PAKVLGLKNK GRIKSGNDAD IVILNEDMEI EGVIAKGKFV
RRG