Gene Tmel_0580 details

Gene Information

• Locus tag: Tmel_0580
• ID: 5297453
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermosipho melanesiensis BI429
• Kingdom: Bacteria
• Replicon accession: NC_009616
• Strand: -
• Start bp: 612865
• End bp: 613560
• Gene Length: 696 bp
• Protein Length: 231 aa
• Translation table: 11
• GC content: 32%
• IMG OID: 640768842
• Product: tetratricopeptide domain-containing protein
• Protein accession: YP_001305832
• Protein GI: 150020478

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.367595
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGGAAGC TTGGGGTATT ATTCTGTTTG ATTTTGTCTA TATTTCTTTT GGCAAATGTT 
GAAGATAATT TTATTGAGGC GCGGAAGAAT CAAGATGTAG AACTTATAAA GGTTTTAATT 
AGTCAATTGG AGAATACGGA TAATTATCTT TTATTTGCTG AATCTCTAAT GGAATATGCT 
TTATGGGGAG CTGGTGAAGA CGAAGATAAA GAAGCGTTGT ATGAAAAAGC TTTGGAGTAT 
GCAAAAAAAG CAATAGAAAA AGAACCTGAA AATGGTAGAG CGTATTACGT TGCTGGAGCA 
ATAATTGGTA GACTTGCACA GTACAAAGGA ATAGTAAAGA GTCTATTTAT GTTGGGGGAT 
TTTGATAAAT ATACAAAAAA AGCAATTGAA TTAACAGATG ATAAATTTTA CAAAGCGCTT 
TCTTTATTAG CAATGGGAAT GAGATATAGA GATGTACCAT GGCCATTGTG TAATTACAAA 
AAATCCGAAG AATATTTGTT AAAGGCTTTA GAAATTTTAC CAAATTATCC AAATATACAT 
CTTGAGATGG GGAAATTATA TGAGAAGTGG GGAAAAAAAG AGTTGGCAAT AAAAGAATAT 
GAATTGGTGT TGAAAGAACC TCCCCACCCT TTATTATTAG AAACGGATAA ACAGGCAAAA 
GAAGAAGCGA GCGAACTTTT AGAAAAATTA AAGTGA 

 

Protein sequence

MRKLGVLFCL ILSIFLLANV EDNFIEARKN QDVELIKVLI SQLENTDNYL LFAESLMEYA 
LWGAGEDEDK EALYEKALEY AKKAIEKEPE NGRAYYVAGA IIGRLAQYKG IVKSLFMLGD 
FDKYTKKAIE LTDDKFYKAL SLLAMGMRYR DVPWPLCNYK KSEEYLLKAL EILPNYPNIH 
LEMGKLYEKW GKKELAIKEY ELVLKEPPHP LLLETDKQAK EEASELLEKL K