| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0577 |
|---|
| Symbol | |
|---|
| ID | 5297042 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermosipho melanesiensis BI429 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009616 |
|---|
| Strand | - |
|---|
| Start bp | 610151 |
|---|
| End bp | 610567 |
|---|
| Gene Length | 417 bp |
|---|
| Protein Length | 138 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 27% |
|---|
| IMG OID | 640768839 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001305829 |
|---|
| Protein GI | 150020475 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0319] Predicted metal-dependent hydrolase |
|---|
| TIGRFAM ID | [TIGR00043] metalloprotein, YbeY/UPF0054 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.585949 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTAACAA CGAATAAGAA TATAGAGGAG AAATATATAA GAACGGTGGA CGAAGTAACA
AGAAACGAAT TGGGAAAAGA AGTAAATATA AATCTTGTTT TCCTTTCAAA AGAAAAAATA
AAAAAAATAA ATAGAGAATT TAGAAATATT AATTCCGAAA CAGATGTTCT AACATTTGTT
TACGGTGATG ACGACTTATT TGCGGAAATA TATCTTTGTG AGGATGTAAT AGAAGAAAAT
GCCAAAAAAT TTTCAAATAC ATATGAAAAG GAACTTTTAA TGGTATTGAT ACATGCAGCT
TTACATTGTA GTGGATATGA TCATGAGTAT GATAAAACGA ATGCAAAAAA GATGTTTGAT
TTACAAGAAA GATATTACGA AAAGTATTTA AAAAAATATG GAATGGATAA CGTTTAG
|
|---|
| Protein sequence | MVTTNKNIEE KYIRTVDEVT RNELGKEVNI NLVFLSKEKI KKINREFRNI NSETDVLTFV
YGDDDLFAEI YLCEDVIEEN AKKFSNTYEK ELLMVLIHAA LHCSGYDHEY DKTNAKKMFD
LQERYYEKYL KKYGMDNV
|
|---|
| |