Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmel_0564 |
Symbol | |
ID | 5296571 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermosipho melanesiensis BI429 |
Kingdom | Bacteria |
Replicon accession | NC_009616 |
Strand | - |
Start bp | 598091 |
End bp | 599914 |
Gene Length | 1824 bp |
Protein Length | 607 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 640768826 |
Product | extracellular solute-binding protein |
Protein accession | YP_001305816 |
Protein GI | 150020462 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000010438 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACGTT TGTTAGTTTT TCTAACTATT TTATTGAGTA TATTTATATT TGCTGAAACA GTTGTGAACT ATGCTTTACT AGAGGATATT ACGACAACAA ATATTTGGAA TCTGTTAGGT TCTGGTTCAT CGGCGTGGAA TTTCTATGTG CAGCTTTGGA AATATCCATC ATTGCTTTCC ATGAACAAAG ATGGAATGTT GATACCATCT GCAGCGTTAG AAGTTCCAAC AATAGTAGAA GAAGATGGAA TGTATACAGT AACGGTTAAA TTGAGAAAAG ATTTAAGATG GAGTGATGGT TCACCATTTA CAGCAGATGA TGTTGTGTTT ACCTATAATA CCATTCAAGA ATTGCAAATA CCAGGTGGTA ACTGGACGGG TGCATATGAA CCCAAAAAGG TTGAAAAAAT TGATCCATGG ACTGTAAAAT TCTACTTTGA AGAAAAAAAG ACAATGACAA TATATTACGA TACACTTATG ACAGCATTGG TATGTAAAAA TTTCTGGGAA CCATATGTAG AAAAAGCTAA ACAACAAGAG AATCCTGTTA ATTGGTTACT AAGTCAAGAA GTTGTAGATC CTGGTATTAC TGCATTAAAC CTTGGGAAGA TAGAAAAAGG TGCATTTGTT GAAGTGAAAA AAGAAGTTGA TGATAACTTT TATTGGGCAA AAGGTGAAAA ATCTATTTAC TATGAAAATG GTGGATTTGT AGTTGAAAAT CCAAACAGTG GTTACAAATG GACAAGTAAC AATCCAGAGC CAAATGGATA TGTAAAGTTA GAAGTTGTTA ATGGACCATA TGTTGATAAA ATTATATATA GAATTTATGG GAACAAGTCT GTTGCGCTAC AAGCACTTCA AAAAGGCGAT GTTGATTTCG TACTGAATCC AAATGGTTTA ACATCTGGAG AATTTGAATC TCTTAAGGGT GTACCTGGCA TAAAATTAAC AGTTAATCCT TCACTTGGAT TTAGATATCT TGCATTTAAC ATGAGAAAAT ATCCTTTCAA TATAAAGGAA TTTAGGCAAG CAATAGCAGC ATTAATAGAC AGGGACTATA TTTGTAATAG GGTACTTCAA GGAAAGGCAA TTCCTCTTGC AACACCTGTA CCACCAGCAA ATACGTTCTG GTTTAATACG GATGTAAAGA CCATAGGTGA AGGACTTTCA AGAGCGGAAA GATATCAATT GGCCGTAGAT CTTCTTAAGA AGGCGGGCTT TAGCTGGGAT CAAGAGCCAG TTATAAATCC AGATAATCCT GCAAATCCAG TTTCCAAACG CGGTAAAGGA CTTAAAGGTC CAGATGGAAA CTACGTACCA GATCTTGAAC TTCTTTCACC ATCAGGTGAA TACGACCCAA TGAGAGCAAC AACAGCAATA TATATTGAGC AATGGGCAAA AGATCTTGGT ATTCCAATTG ATGTAAAACT TACAGATTTC AATGAAATAG TTACAAGGGC ATTTGATGAG GTTGATTTTG ATATGTACAT GCTTGGTTGG GGTATAGGAA GAGTACCAAC ATACTTTAAG AGCTTCTGGG CATCAGACCA AATGGCACCA GAAGGATTTA ACACTCCAGG TTACAATAAT CCTGAATTTG ATGCATTAGT AGAAGAATTT GAAATGGCAG ATAACTTTGA TGAAGCAGTT GAAGCGATAA AAGAAGCACA AGAACTTCTT GCAGAAGATC TTCCATATAT CATTCTCTTT ACAACACCAA TTTACGAGGC TTACAGAGAT ACAATCCAAT TCCCGTACAC AGACACACTC GATGGTATTC AAAACTATAA CGGATTCCCG GAAAATGTAA TGAAAGTAAA ATAA
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Protein sequence | MKRLLVFLTI LLSIFIFAET VVNYALLEDI TTTNIWNLLG SGSSAWNFYV QLWKYPSLLS MNKDGMLIPS AALEVPTIVE EDGMYTVTVK LRKDLRWSDG SPFTADDVVF TYNTIQELQI PGGNWTGAYE PKKVEKIDPW TVKFYFEEKK TMTIYYDTLM TALVCKNFWE PYVEKAKQQE NPVNWLLSQE VVDPGITALN LGKIEKGAFV EVKKEVDDNF YWAKGEKSIY YENGGFVVEN PNSGYKWTSN NPEPNGYVKL EVVNGPYVDK IIYRIYGNKS VALQALQKGD VDFVLNPNGL TSGEFESLKG VPGIKLTVNP SLGFRYLAFN MRKYPFNIKE FRQAIAALID RDYICNRVLQ GKAIPLATPV PPANTFWFNT DVKTIGEGLS RAERYQLAVD LLKKAGFSWD QEPVINPDNP ANPVSKRGKG LKGPDGNYVP DLELLSPSGE YDPMRATTAI YIEQWAKDLG IPIDVKLTDF NEIVTRAFDE VDFDMYMLGW GIGRVPTYFK SFWASDQMAP EGFNTPGYNN PEFDALVEEF EMADNFDEAV EAIKEAQELL AEDLPYIILF TTPIYEAYRD TIQFPYTDTL DGIQNYNGFP ENVMKVK
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