Gene Tmel_0551 details

Gene Information

• Locus tag: Tmel_0551
• ID: 5296585
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermosipho melanesiensis BI429
• Kingdom: Bacteria
• Replicon accession: NC_009616
• Strand: -
• Start bp: 585867
• End bp: 586538
• Gene Length: 672 bp
• Protein Length: 223 aa
• Translation table: 11
• GC content: 27%
• IMG OID: 640768812
• Product: thioredoxin-related protein-like protein
• Protein accession: YP_001305803
• Protein GI: 150020449
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG2143] Thioredoxin-related protein

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGAAAAG TATTTTTTTT AACTTTAATA ATTTTCGCAA CGTTTATATT TGCATATAAT 
TATACTTTTT ACGATTTGGG TATTGCTCAC CAAATTTCAA AAATTGAGGA TAAGCCTTTA 
TTAATATATT TTTCTTCGCC TTCATGTGTG TACTGTAAAA AATTCGAAAA TGAAGTGTTA 
ACTTCAGAAG ACTTTCAGCA AATTTTAAGA GCATCATACG TATTTGCAAA AATAAATCCC 
AACACGCAAA AAACAACATT TATGAGTGAG GAGTTTACAA ACATGGAACT TTTTTCTGCA 
TTTGGAGTAA GAGGAACACC AACTTTTGTA TTTTTATATA TGGATAGTGG AATAACATCT 
ATACCAGGAT ATATGTCGTT AGAAGACTTT AAAAAGGCAC TTATGTATAT ACTAAAAGTC 
ACATTTGAAA ATTACAAAGA AAGTTTTCAA ACGTATTCTA AACAGAAAGA TTTTTGCCTT 
GGAAAAAGTA AAATAATTAA GGTTTCAAAA GAAGACTTTG ATCTTGTAAA AGAAATGGAT 
AAAAATTCAG TTGAACTAAA AGAGATTAAA GATAAGATAG ATATCTACAA AACATATTTA 
ACAAATTCCA GAGAAATTGC GGATAAATTA TTTGAAAAAG GAGTATTAAG AATACTTCTT 
TTGGAGGATT GA 

 

Protein sequence

MRKVFFLTLI IFATFIFAYN YTFYDLGIAH QISKIEDKPL LIYFSSPSCV YCKKFENEVL 
TSEDFQQILR ASYVFAKINP NTQKTTFMSE EFTNMELFSA FGVRGTPTFV FLYMDSGITS 
IPGYMSLEDF KKALMYILKV TFENYKESFQ TYSKQKDFCL GKSKIIKVSK EDFDLVKEMD 
KNSVELKEIK DKIDIYKTYL TNSREIADKL FEKGVLRILL LED