| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0486 |
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| Symbol | |
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| ID | 5298236 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | + |
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| Start bp | 511969 |
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| End bp | 513054 |
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| Gene Length | 1086 bp |
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| Protein Length | 361 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 640768747 |
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| Product | D-alanine--D-alanine ligase |
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| Protein accession | YP_001305738 |
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| Protein GI | 150020384 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
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| TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTAAATA TCGGTATATT TTTTGGCTCA AAAAGTGTAG AACACGAAAT ATCCATAATA
ACTGCACAGC AAGTACTTTC TTCCATTGAT AGGAAAAAAT ACAATGTTAT CCCTATTTAT
ATATCCAAAT CTGGCGAATG GTTTACAGGA AAAGTTTTAG AAGATTTAGA AACTTTTAAA
GATTTTGATA AGTTAGAAAA AAAAGCAAAA AAAATAGATA GTTTCAGTGT AAAGAATAAC
AAACTTCTTC TAAAATATGG ACTAAAAAAG CAAACGATAG ATTTCTGCTT TTTAGTTTTT
CATGGCACAA ACGGTGAAGA TGGAACTTTT CAGGGAATGT GTGAAATTTT TGGGATACCA
TACTCTGGTT GTAATCATTT TTCATCAGCT TTTACTATGG ATAAGGTAGT AACAAAACTT
TTGTTGAAGG AGAAAGAAAT TTCAGTTGTA GATTTTGAAT ACACAACAGA AATAAATGAA
GAATTTTTTA AAAGATGCGA GAAAAATTTA GGCTATCCTA TGATTGTAAA ACCTGCAAGA
CTTGGTTCAA GTATAGGTGT ATCAAAAGTG GTAGATAGAA AAAATTTCGA AGAAGCAGTA
AAAAATGTAC TCTTATTCGA TAACAAAGTA TTAGTTGAAA AATGGATAAA CGCACGTGAA
ATCAATTGTG CCGTCATGGG ATACAAAAAT ATCTTTGTTT CTGAACTTGA AGAAATAAAC
AAGAAAAACG ACTTTTTTAA CTTTGAAGAA AAATACTTTA AAAAAGGAAA AAAATTCTCA
AATCACATTA TTCCTGCTAG AATAGATGAA AATTTAAAAA ATAAGATAAA AGAAATTGCA
AAAGACACGT TTAAAATTCT AGAATGCTCT GGAAACGTAC GCATAGATTT CTTGATAGCA
GATAAAATAT ACGTTAACGA AATAAACACT ATACCTGGTG CTTTATCATT TTACATATGG
CAGAAGAGTG GATTTACATT TTCGCAGATA ATTGATAACA TGATAAACAT GGGACTAGAA
AGATTCAAAG ACAAAAAGAT AGTTTCAATA GATACCAATA TTTTGAAAAT AAAGGTGGGC
AAATGA
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| Protein sequence | MLNIGIFFGS KSVEHEISII TAQQVLSSID RKKYNVIPIY ISKSGEWFTG KVLEDLETFK
DFDKLEKKAK KIDSFSVKNN KLLLKYGLKK QTIDFCFLVF HGTNGEDGTF QGMCEIFGIP
YSGCNHFSSA FTMDKVVTKL LLKEKEISVV DFEYTTEINE EFFKRCEKNL GYPMIVKPAR
LGSSIGVSKV VDRKNFEEAV KNVLLFDNKV LVEKWINARE INCAVMGYKN IFVSELEEIN
KKNDFFNFEE KYFKKGKKFS NHIIPARIDE NLKNKIKEIA KDTFKILECS GNVRIDFLIA
DKIYVNEINT IPGALSFYIW QKSGFTFSQI IDNMINMGLE RFKDKKIVSI DTNILKIKVG
K
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