Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmel_0468 |
Symbol | |
ID | 5297908 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermosipho melanesiensis BI429 |
Kingdom | Bacteria |
Replicon accession | NC_009616 |
Strand | - |
Start bp | 495175 |
End bp | 495897 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 640768729 |
Product | ABC transporter related |
Protein accession | YP_001305720 |
Protein GI | 150020366 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATATTGG AAGTAAGAGA TTTACACAAA AGCTTTGGAG ATTTAAAAGT GTTGAAAGGT ATAAACTTAA CAGTTGAGAA AGGAGAAACT ATCGTAATAA TAGGTCCAAG TGGTGGTGGG AAAAGTACGT TTTTAAGATG TATTAATCAT TTAGAAGATT ATCAAAAAGG TGAAATAATA TTTTTAGGTA AGAAAGTTGA TAAGTCTGAA AATATAAATG AATTAAGGAC AAAAATAGGT ATGGTATTTC AACATTTTAA TTTGTTTCCT CATATGTCGG TGTTAGATAA TTTAATTCTT GCACCAACGA AAGTACTAAA AATGGATAAA GAAAAGGCTA TTAAAAAAGC TAAAAAACTT CTAGAAAGAG TTGGACTATT GGAAAAAATA AATTATTATC CCGATAATCT TTCAGGAGGT CAAAAACAAC GTGTTGCGAT AGCTAGAGCA CTTATGATGG ATCCAGTGCT TATGCTATTT GATGAACCTA CATCTGCACT TGATCCAGAG CTTGTTGGTG AAGTACTTGA AGTAATGAAA GATTTAGCAA AATCTGGTAT GACAATGATA GTTGTTACCC ACGAAATAGG GTTTGCGAGA GAAGTAGCAG ATAGAATTAT ATTTATGGAT CAAGGGGTTA TAGCAGAAGA TGGAACTCCT GAGGAAATAT TTAAAAATCC AAAAAAACAA AGAACAAAAG AATTTTTAAG ACATATATTG TAA
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Protein sequence | MILEVRDLHK SFGDLKVLKG INLTVEKGET IVIIGPSGGG KSTFLRCINH LEDYQKGEII FLGKKVDKSE NINELRTKIG MVFQHFNLFP HMSVLDNLIL APTKVLKMDK EKAIKKAKKL LERVGLLEKI NYYPDNLSGG QKQRVAIARA LMMDPVLMLF DEPTSALDPE LVGEVLEVMK DLAKSGMTMI VVTHEIGFAR EVADRIIFMD QGVIAEDGTP EEIFKNPKKQ RTKEFLRHIL
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