| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0459 |
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| Symbol | |
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| ID | 5297863 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | + |
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| Start bp | 483861 |
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| End bp | 486389 |
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| Gene Length | 2529 bp |
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| Protein Length | 842 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 640768720 |
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| Product | pullulanase, type I |
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| Protein accession | YP_001305711 |
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| Protein GI | 150020357 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
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| TIGRFAM ID | [TIGR02104] pullulanase, type I |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.712908 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAGAT TGTTAGTGTT TTTCTTTGTT TTGTTATCTT TTATTGCAAT TTCATCTACA
ACCATAATTG TACATTACCA TCGTTTCGAT GGTAACTACA ATGGATGGAA CTTGTGGATT
TGGCCTATGA AACCCATAGC AATGGAAGGA AAATCCTATC AATTTACAGA TCAAGATAAT
TTTGGTGTAG TAGCTAAGAT AACACTTGAC CTGGATCTTG AACAGGTGGG AATAATCGTA
AGGCTCAACG ATTGGCAAGC AAAAGATGTA GCAAAAGATA GGTTTATAGA CATAAAAGAT
GGAAAAGCGG AGGTGTGGAT TTTGCAAGGA GTCGAGGAAA TTTACACAAA AAAACCTGAT
ACAAGGCCAA GGGTATTTTT CGCAGCTGCA AAAGCAGATA ATGTAATTGA AGCATATTTA
ACAAATACAG TTGACACAAA GAATGTAAAT ATAAAAGTTA AAGTAGATGG CAAAGAAAAG
AAAGTATTAA ATGTGGAAAA AGCAGATCCA ACGGATCTTT CTAAGACAAA TTACATAAGA
ATAACTTTAG CAGATAAATT AACTGAAGAT GATTTAAAAA AAGATGTTAA AATATATATC
GAGGGCTTCT CTCCGTCTAC TGTTTATATG TTAGATGTTT TAGACAAATT TTATTTTGAA
GGTGAGCTCG GTTACATATA CTCCAAAAAC AGGACCATAT TTAGGACCTG GTCTCCTGTT
TCAAAATCTG CACAAGTTTT ATTGTATAGA AACGGAGAAG ACAAAAAACC ATACAAAATA
GTTAATATGA AATACATGGG AAATGGTGTA TGGGAGGCCA GGGTTGATGG TGACTTAGAT
GGTATCTTTT ACAAATACAG ATTTGAAAAT TACGGCAAAA TAAGGGAAAC AGTAGATTAT
TATTCCAAAG CTGTATATAA AAATGGATTA AAAAGTGCAG TTGTTGATCT TTCAAAGACA
AATCCTGATG GTTGGTTCAA TGATAAAAGA CCATACATGA AAACACCCGA AGATGCAATA
ATTTACGAAA TTCACATTGC TGATATAACT GGCCTAGAAA ATTCAGGTGT AAAAAACAAA
GCAACGTATC TGGGATTGAC AGAAGAAGGA ACAAAAGGGC CAGGCGGTGT AACTACAGGA
TTGTCTCATC TTGTAGAGCT TGGGATTACT CATGTTCATA TCTTACCCAT ATTTGATTTT
TACACGGGCG ATGAGGAAAA TAAAAATTTC GAAAAAAGTT ATAATTGGGG ATACGACCCA
TATCTCTTCA CTGTACCTGA AGGAAGATAC TCAACAGATC CAAAAAATCC ATACGCTAGA
ATAATAGAAG TCAAAAAAAT GATTCAAAAG CTTCACGAAA ATGGAATTAG AGTAATACTT
GATATGGTCT TCCCACATAC ATTTGGAATA GGTGAACTTT CCGCCTTTGA TCAAACAGTA
CCATATTACT TTTACAGACT TGATAAAACA GGAGCATATT TAAATGAAAG TGGTTGTGGA
AATGTGATAG CAACGGAAAG ACCGATGATG AGAAAATACA TAGTAGATAC AATTTTGTAT
TGGATTAATG AATATCACGT GGATGGATTT AGATTTGATC AAATGGGCCT AATAGATAAA
AAAACTATGC TAGAAATTGA AAGAAAAGCA CACAAAATTG ATAAGACGAT TATATTATAT
GGTGAACCTT GGGGAGGTTG GGGAGCACCA ATTAGGTTTG GTAAATCTGA CGTTGCACAT
ACACACATTG CAGCATTCAA TGATGAATTT AGAGATGCAT TAAGAGGTTC TGTATTTGAT
GAAAAGGTAA AAGGATTTTT AATGGGGGCT ATTGGAAAAG AAACACGCGT TAAAAGAGGA
GTTGTTGGAA GTATTCAATA TAATTCACGA ATAAAAAGCT TTGCGGCAGA TCCTGAAGAA
ACTATTAATT ACGTTGCATG TCATGATAAT CATACATTGT GGGATAAAAA TTACCTTGCG
GCAAAATACG ATAAAAAATA TAAATGGACA GATGAAATGT TAAGAAACGC ACAAAAACTT
GCTGGTGCTA TACTTTTAAC ATCACAGGGA ATTCCTTTTA TTCATGCTGG TCAAGATTTC
GCACGTACAA AGAATTTCAA CGAAAATTCT TACAATGCAC CTATTTCCAT TAACGGATTA
GACTATCAAA GAAAATACGA ATATTTAGAT GTATTTGAAT ATTACAAAGG ACTTATTAAA
CTAAGAAAGG GGCACCCGGC ATTTAGAATG ACAAATGCAC AAGAAATAAA AGAACACATC
AAATTTTTAC CCAGCAGAAA AAGAAGAATA GTTTCTTTTG TCATATCCAA TCACGCAAGA
AATGACGAAT GGAAAGATAT TTTGGTAATA TATAATGGAA ATGTTGATTC TGTAGAATAT
GAACTTCCTG AAGGCGAATG GAATATGATA GTAAATGGGA AAATTGCAGG AACTGACATT
ATTGAAAAAG TTTCTGGTAA AATAATACTC GAAGGAATTT CTGCATATGT TTTTTACAAG
AACAAATAA
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| Protein sequence | MKRLLVFFFV LLSFIAISST TIIVHYHRFD GNYNGWNLWI WPMKPIAMEG KSYQFTDQDN
FGVVAKITLD LDLEQVGIIV RLNDWQAKDV AKDRFIDIKD GKAEVWILQG VEEIYTKKPD
TRPRVFFAAA KADNVIEAYL TNTVDTKNVN IKVKVDGKEK KVLNVEKADP TDLSKTNYIR
ITLADKLTED DLKKDVKIYI EGFSPSTVYM LDVLDKFYFE GELGYIYSKN RTIFRTWSPV
SKSAQVLLYR NGEDKKPYKI VNMKYMGNGV WEARVDGDLD GIFYKYRFEN YGKIRETVDY
YSKAVYKNGL KSAVVDLSKT NPDGWFNDKR PYMKTPEDAI IYEIHIADIT GLENSGVKNK
ATYLGLTEEG TKGPGGVTTG LSHLVELGIT HVHILPIFDF YTGDEENKNF EKSYNWGYDP
YLFTVPEGRY STDPKNPYAR IIEVKKMIQK LHENGIRVIL DMVFPHTFGI GELSAFDQTV
PYYFYRLDKT GAYLNESGCG NVIATERPMM RKYIVDTILY WINEYHVDGF RFDQMGLIDK
KTMLEIERKA HKIDKTIILY GEPWGGWGAP IRFGKSDVAH THIAAFNDEF RDALRGSVFD
EKVKGFLMGA IGKETRVKRG VVGSIQYNSR IKSFAADPEE TINYVACHDN HTLWDKNYLA
AKYDKKYKWT DEMLRNAQKL AGAILLTSQG IPFIHAGQDF ARTKNFNENS YNAPISINGL
DYQRKYEYLD VFEYYKGLIK LRKGHPAFRM TNAQEIKEHI KFLPSRKRRI VSFVISNHAR
NDEWKDILVI YNGNVDSVEY ELPEGEWNMI VNGKIAGTDI IEKVSGKIIL EGISAYVFYK
NK
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