Gene Tmel_0457 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_0457 
Symbol 
ID5297498 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand+ 
Start bp481231 
End bp481800 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content24% 
IMG OID640768718 
ProductTetR family transcriptional regulator 
Protein accessionYP_001305709 
Protein GI150020355 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGGAAA AAATATTAAA TATTGCAATT GAAGAATTTG CAAAAAAAGG TTATTTTGGT 
GCATCAACTA ATGTTATCTC AAAAAAAGCT AATGTCTCAA AAGGAGCACT CTTTTATCAT 
TTTAAAAGCA AAGAAGGGCT ATATATTGAA TGTTTCAAAA GCTTTATCCA ATTATTTGAA 
TTGGAATTTC TTAAATTTTA TAATGAAAAT GATAACTTAG ACTTTTTTAC TTTCTTATTA 
AAATGGTCTC AGAGAAAGGT TGAAATGACA AATGAAATGA AATACGTACT AGATTTTTTT 
GAAACAATTA AAAACATACC AAAGAATATT GAAGAAAAAA TCCAAGATAT TTTAAGCAAA 
AACTATGAAA AATATATCCC TTTTTTATGG GAAAAGTTCG AAAAGTTAAA TCTGAGAAAG 
GAATTAGATA AAAAATTTGC ATTTTCTATG GTTTTGGATT TTTTCGAAAC CTTCTCTAAA 
AGGTACTATA AAACTACTAT TGAACCTAAA AAAATATTTT TAGATTTCAA AAATGTTATG 
GAAATTATAA AATATGGAAT ACTTGAGTAA
 
Protein sequence
MREKILNIAI EEFAKKGYFG ASTNVISKKA NVSKGALFYH FKSKEGLYIE CFKSFIQLFE 
LEFLKFYNEN DNLDFFTFLL KWSQRKVEMT NEMKYVLDFF ETIKNIPKNI EEKIQDILSK 
NYEKYIPFLW EKFEKLNLRK ELDKKFAFSM VLDFFETFSK RYYKTTIEPK KIFLDFKNVM 
EIIKYGILE