Gene Tmel_0398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_0398 
Symbol 
ID5296975 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp416711 
End bp417445 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content29% 
IMG OID640768661 
ProductXRE family transcriptional regulator 
Protein accessionYP_001305652 
Protein GI150020298 
COG category[K] Transcription 
COG ID[COG1476] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTTAG GAGAGAAAAT AAAGCAATTA AGATTGGAGC GTGATATAAG TCAAGAGCAG 
CTTGCAAAAA GGCTAGGTAT TTCAAGAGAA TCGATTTCTC ATTATGAAAA TAACAGAATA
GTTCCACCTG TACATATTCT CAGAGAAATT GCCAAAATTT TCAATGTTTC TGTAAATTAT
TTTTTTGAAG AAGAACATTA CGATAAGAAT GTAAAAGGAG AAAGTGAGCT TGTTGATTAT
AATATTCCGC AAAACTTTAT GGGATTTATG GTAGTTGGCT CCCATTCTAG AGGCAAGTTA
TTAAATAATA AAATTTCAAA AAAACAAAAA GGTATACCTG TTTTAAGATT TCCTAATCCT
AGTGAAGGAG AACCTGAAAA TCAACTAATA AAAGTGAGAT ATATTGATTA TTTACAAAAA
AAAGATATAG ATTATGCACT TAGATTAAAC TCTGATATTA TAGAACCCTT AATTCCTAAA
GGTGCTCTTC TATTAGTTAG TACTAGAAAT AATAGACTTC CTCAAAATGG TGAGTTAATT
GTTTATTACT TGAATGGTAA ATTTGGAGTC AGATGGTATT TTCAAAAGGG TGATAATGTA
ATTTTAATTG CTGAAAACAG CAAGTATTTA CCTATAATAA CTACTCGGGT TGATTTTAAG
TTTGCTGGAA TTGTAAAGGA TGTAATATTT GATTTTAAAC CTCAGAAAAC GACTTTTCCT
GAAGATAGAG ATTAA
 
Protein sequence
MDLGEKIKQL RLERDISQEQ LAKRLGISRE SISHYENNRI VPPVHILREI AKIFNVSVNY 
FFEEEHYDKN VKGESELVDY NIPQNFMGFM VVGSHSRGKL LNNKISKKQK GIPVLRFPNP
SEGEPENQLI KVRYIDYLQK KDIDYALRLN SDIIEPLIPK GALLLVSTRN NRLPQNGELI
VYYLNGKFGV RWYFQKGDNV ILIAENSKYL PIITTRVDFK FAGIVKDVIF DFKPQKTTFP
EDRD