Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmel_0338 |
Symbol | |
ID | 5297829 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermosipho melanesiensis BI429 |
Kingdom | Bacteria |
Replicon accession | NC_009616 |
Strand | + |
Start bp | 345452 |
End bp | 346237 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 640768595 |
Product | hypothetical protein |
Protein accession | YP_001305593 |
Protein GI | 150020239 |
COG category | [S] Function unknown |
COG ID | [COG3330] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTGATG AAAATGTTGA AAAATTAAAA GAATGGTTAT CTGAAAAAAG AACTATTCAA GAATTAAAAG CTATGGCAAA AAACCTTGGG TTAAAGGTCA AAAGAATGAT GAAGAAAAAA GAGGTTATAA AGCTATTGGA AAGTTATATA AAACAAAATG AAGAAATTAA AAAACTTGAA AGACCTTCTT CGTCAACTTC TGCTTCTGAC AGCATAAAAA AAGAAGACAA ATTATCAAAA GAAGAACTTT ATCTTCCAAA ATCGTACAAC AAAAATAAGC TAGTATTAAT GCCAGTAAAT CCAAACTGGT TACATGCATA CTGGGACTAT ACCAAAGAAA CATTTGAAAC CCTCAACAAA CTTCCAAAAG AATACAGGAT TGTTTTAAGA ATTTACGATG TAACATTTAT AGAATTTACC GGAAATAACG CTCATAGGAC TTTTGAAATA AGAATAACTC CTAATATGAG AAACTATTAT ATAAACGTAC CTATACCTAA TGCAGATTAT TTAGCAGAAA TAGGATATAT AACACCAGAT GGAAATTTTT ATTCATTAAT TAGATCAAAC GTTTGTAAAA CTCCACCAAA CTCACCAAGT AACAGTACAA GAGAAAAATG GCTTGATTTA AGAAAAAAGA GAAAAATAGT AACTCCTTCC GACGGTGTTT TAGTAAAAGA AGTAGAAACA ATACCAGGCT CTATTTTCAA AATTGAAGAA ATACAAAATA AGAGTGAACA AATTTGGGAA CTATTTAGTA AACTTAGAAG TGGAAGGGGG ATATAA
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Protein sequence | MFDENVEKLK EWLSEKRTIQ ELKAMAKNLG LKVKRMMKKK EVIKLLESYI KQNEEIKKLE RPSSSTSASD SIKKEDKLSK EELYLPKSYN KNKLVLMPVN PNWLHAYWDY TKETFETLNK LPKEYRIVLR IYDVTFIEFT GNNAHRTFEI RITPNMRNYY INVPIPNADY LAEIGYITPD GNFYSLIRSN VCKTPPNSPS NSTREKWLDL RKKRKIVTPS DGVLVKEVET IPGSIFKIEE IQNKSEQIWE LFSKLRSGRG I
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