Gene Tmel_0338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_0338 
Symbol 
ID5297829 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp345452 
End bp346237 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content29% 
IMG OID640768595 
Producthypothetical protein 
Protein accessionYP_001305593 
Protein GI150020239 
COG category[S] Function unknown 
COG ID[COG3330] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTGATG AAAATGTTGA AAAATTAAAA GAATGGTTAT CTGAAAAAAG AACTATTCAA 
GAATTAAAAG CTATGGCAAA AAACCTTGGG TTAAAGGTCA AAAGAATGAT GAAGAAAAAA
GAGGTTATAA AGCTATTGGA AAGTTATATA AAACAAAATG AAGAAATTAA AAAACTTGAA
AGACCTTCTT CGTCAACTTC TGCTTCTGAC AGCATAAAAA AAGAAGACAA ATTATCAAAA
GAAGAACTTT ATCTTCCAAA ATCGTACAAC AAAAATAAGC TAGTATTAAT GCCAGTAAAT
CCAAACTGGT TACATGCATA CTGGGACTAT ACCAAAGAAA CATTTGAAAC CCTCAACAAA
CTTCCAAAAG AATACAGGAT TGTTTTAAGA ATTTACGATG TAACATTTAT AGAATTTACC
GGAAATAACG CTCATAGGAC TTTTGAAATA AGAATAACTC CTAATATGAG AAACTATTAT
ATAAACGTAC CTATACCTAA TGCAGATTAT TTAGCAGAAA TAGGATATAT AACACCAGAT
GGAAATTTTT ATTCATTAAT TAGATCAAAC GTTTGTAAAA CTCCACCAAA CTCACCAAGT
AACAGTACAA GAGAAAAATG GCTTGATTTA AGAAAAAAGA GAAAAATAGT AACTCCTTCC
GACGGTGTTT TAGTAAAAGA AGTAGAAACA ATACCAGGCT CTATTTTCAA AATTGAAGAA
ATACAAAATA AGAGTGAACA AATTTGGGAA CTATTTAGTA AACTTAGAAG TGGAAGGGGG
ATATAA
 
Protein sequence
MFDENVEKLK EWLSEKRTIQ ELKAMAKNLG LKVKRMMKKK EVIKLLESYI KQNEEIKKLE 
RPSSSTSASD SIKKEDKLSK EELYLPKSYN KNKLVLMPVN PNWLHAYWDY TKETFETLNK
LPKEYRIVLR IYDVTFIEFT GNNAHRTFEI RITPNMRNYY INVPIPNADY LAEIGYITPD
GNFYSLIRSN VCKTPPNSPS NSTREKWLDL RKKRKIVTPS DGVLVKEVET IPGSIFKIEE
IQNKSEQIWE LFSKLRSGRG I