| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0303 |
|---|
| Symbol | |
|---|
| ID | 5297764 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermosipho melanesiensis BI429 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009616 |
|---|
| Strand | + |
|---|
| Start bp | 308922 |
|---|
| End bp | 310091 |
|---|
| Gene Length | 1170 bp |
|---|
| Protein Length | 389 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 28% |
|---|
| IMG OID | 640768561 |
|---|
| Product | integral membrane sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_001305560 |
|---|
| Protein GI | 150020206 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTATTT CAACAAAAGT AACTTATATT ACAACAGTAA TTTCGGCAAT TATATTAGCA
ATAGTTTTGA TATTTATATA CTCAACAATA CAAAATCTCA TAATAAAATC CACAAAAGCA
GACTTACTCG AATCTGCACG CCTTCCCATG ATGAGACATA TGAGAAAAGA TATTTATCTT
TTAAAAGATG GTATATTAAT TTCCGATCCT TATGGTTTGG GAATTATGAA TAAAAATGGT
AAGATAAAAA TCAACGATAG AGTTTATTTG TTTGTCAAAC CATATCAAAA TACAATAATT
GCAAAAGATA TTACATCAAT TGAAAATTTC ATTTTGAACA TAAAGAAAAG ATTTATCACA
TTATTTATCT TTTCAACACT TTTAATAAGT TTTTCAACTT ATCTTATAAC AAAAAACTCG
ATGAAACACC TCAAAAATTT CGTAATCAAA CTCTCAAAGT TAAAAGGTAC AGAACTTAAC
TATAGATTTG CAAAACCAAA CACAAAGGAC GAAGTCGACG AACTAGTTGA AAAATTCAAC
GAACTAATGG ACAAAGTTGA AAAAAATTAT AAATTACAGG AAGAATTTGT TTCAAATGTT
TCACATGAAT TAAAAACACC AATAGCAAAC CTAATTGGCT ACTCCAAAAT GCTCCAAAGA
TGGGGCATGA AAGATAAGGA AATACTAAAA GAAAGTGTAG AAAATATCTT CAATACCGCA
TTGAACATGA AAGAGTTAGT AGAAAATATG ATAATTATAT CAAAAAGATA CGATCTTGAA
ACCGAAAAAG TAAACCTAAA ACCTTTTGTA GAAAAGATAG TCCCAAAAGA AGTAAAAATT
TCTGGAAATG GTACAATTAT TGCAAATAAA GATGCTTTGG AAATAGTCAT TAAAAATCTT
GTAAATAATG CACTCACACA CGGAAAAGCT CCCGTTGAAG TATATTTGTA TGAAAATAAA
ATAGAAATAA AAGATTCTGG AAATGGTATA TCAGACGATT TAAAAAATAA AATATTTGAA
AAATTTTCAA AATCAAGGAA ATCAAAAGGC CATGGACTTG GACTGTATAT TGTAAAAAAA
CTTTGTGATC AAATGGGACT TAATGTATAT TTAAAAGATT GCAAGCATAC AACATTTGTT
ATTGAAAGGG GTGAAAAACA TGAAGACTGA
|
|---|
| Protein sequence | MSISTKVTYI TTVISAIILA IVLIFIYSTI QNLIIKSTKA DLLESARLPM MRHMRKDIYL
LKDGILISDP YGLGIMNKNG KIKINDRVYL FVKPYQNTII AKDITSIENF ILNIKKRFIT
LFIFSTLLIS FSTYLITKNS MKHLKNFVIK LSKLKGTELN YRFAKPNTKD EVDELVEKFN
ELMDKVEKNY KLQEEFVSNV SHELKTPIAN LIGYSKMLQR WGMKDKEILK ESVENIFNTA
LNMKELVENM IIISKRYDLE TEKVNLKPFV EKIVPKEVKI SGNGTIIANK DALEIVIKNL
VNNALTHGKA PVEVYLYENK IEIKDSGNGI SDDLKNKIFE KFSKSRKSKG HGLGLYIVKK
LCDQMGLNVY LKDCKHTTFV IERGEKHED
|
|---|
| |