| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0280 |
|---|
| Symbol | |
|---|
| ID | 5297670 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermosipho melanesiensis BI429 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009616 |
|---|
| Strand | - |
|---|
| Start bp | 288920 |
|---|
| End bp | 289633 |
|---|
| Gene Length | 714 bp |
|---|
| Protein Length | 237 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 640768537 |
|---|
| Product | biotin/lipoate A/B protein ligase |
|---|
| Protein accession | YP_001305537 |
|---|
| Protein GI | 150020183 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0095] Lipoate-protein ligase A |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.00000980162 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTTACA TCGAGACTTG GGATTTACCC GGAGATTTAA ATATGGCAAT CGATTATATT
TTAGGTACTT TGAATGTTCC ATTTTTTAGA CTTTATACTT GGGAAAGACC TACGCTATCG
TTGGGAAAAA ATCAATCTTT AGATGATGTT AATTTTGAAT TTTTAAAAGA AAATGACATA
GATTGTGTGA GAAGGCCCAC AGGTGGACGT GCTGTTTTAC ATAAGGATGA GATAACGTAC
AGTGTTGTAA TTCCAAATGG ACATAGTTTA TATAGATTAT CTGTTTTGAA GTTGTATAAG
TTTTTATCTA AATTAATAGT TGATGCGTTG AATAACATGG GTTTACCAGT TAAAATGGTT
GGCCGTGGTT TAAGGGGTAA CACGCATATT TGTTTCGATG CTCCTTCTTG GTATGAAATT
GTATTAAATG ATAAAAAGGT TGTAGGTAGT GCTCAAATGA GAACAAAGTC ATTTGTATTG
CAACATGGAT CTATTGTTTT AAAAACAACG TATAATGTTG AGAGCTGTTT TAAAAAATTG
GATAGAAAAA TAACACAATA TGGTCTAGAT CAATACAAAA TATTAAATGA ATTAAAAGTT
AGAGATGCTT TATATGTGGA ATTTGATAAA GTATTTGGTT TAAAAAAATT TAAAGATTTG
GATAAAGTAT TGCAAGAGGC TCAGAAAGCG AGGAGAAGGT TTTGTTGTAC ATAG
|
|---|
| Protein sequence | MFYIETWDLP GDLNMAIDYI LGTLNVPFFR LYTWERPTLS LGKNQSLDDV NFEFLKENDI
DCVRRPTGGR AVLHKDEITY SVVIPNGHSL YRLSVLKLYK FLSKLIVDAL NNMGLPVKMV
GRGLRGNTHI CFDAPSWYEI VLNDKKVVGS AQMRTKSFVL QHGSIVLKTT YNVESCFKKL
DRKITQYGLD QYKILNELKV RDALYVEFDK VFGLKKFKDL DKVLQEAQKA RRRFCCT
|
|---|
| |