| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0260 |
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| Symbol | |
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| ID | 5296506 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | - |
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| Start bp | 262265 |
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| End bp | 263755 |
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| Gene Length | 1491 bp |
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| Protein Length | 496 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 640768516 |
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| Product | peptidase M50 |
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| Protein accession | YP_001305519 |
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| Protein GI | 150020165 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0750] Predicted membrane-associated Zn-dependent proteases 1 |
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| TIGRFAM ID | [TIGR00054] RIP metalloprotease RseP |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.650665 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGGTGA ATAGTATTAT AAGTTTTATT TCATTTATAT TAGTTTTTAT GTTTGTAGTG
GTTGTCCATG AATTTGGTCA TTTTTTGTTT GCCAAGATAT TTAAAGTAAC TGTTCTAGAA
TTTTCTATTG GATTTGGTCC TGCAATTTTT AAGAAACAAT TTAAAGAAAC ACTTTTCAAG
ATAAATGTAA TTCCCTTTGG TGGCTATGTA CGTTTAAAAG GTGAGGACTT TAACGAAGAG
GAAGAAGATG GTCTCTATGC AAAGCCCGCA TGGCAGCGTT TGTTAATAGC TTTTGCTGGG
CCTTTGTTTT CGATACTTGC TGCGTATATA TTGTTTGTTC CAATAGTAAA TAACTGGGGT
GTACCTGCGG TAACTATAGG AAGGGTTATA GAAAATTCAC CAGCGTTTGA ATATGGTTTA
AAAGAAGGAG ATGTGATTTT AAAGGTAAAC GGGAAAAGAG TATTTGATTC TATAGAGGTA
AGTAATGAGA TAAAGAAAGG GAATGTTGTA AAGCTTACTA TACTCAGAGA TGACAAAATT
TTAGAAAAAA CTATACCTCC ACGTATTTCA CCACCTGAAT ATGTTTTTAT TTTGGATGAT
GTACGAGGGA AAATATATGG AAAGATAAAA AAGATAAATG GTTATAAATT GGGAGTTGAT
TTAGATGTAA AAAAAGAAGA TTTTGTAGAA ATTGAAGATG AATTTGGGAA TGTTTTATCA
GGTGTTGTGT TAAGTTTTAC ATTTGTTGAT GAAAGACCTA CTATAGGGTT TTATTATGCG
GGATTTAAGC CTGTAGCAAA TAAAAATATT GAACCGTTTT TGTCAAACGA TAGAATAGTT
AAAGTAAATG ATATGGAAAT AGAAGATTAT GTTTCTTTAA TAAGTCTTAT TTCAAGACTT
TCCCTGAAAG AAAAACAAGT ATACATTGAT ATTTGGGGAG ATGAAATAAA AGAAAAGCTC
AACCCTCTTT CTGAAAGGTT AGAAATAGTT GTTCAAAGAA ATGGTGAAAA GATGACAATA
GATTTAGATA AAGAAGAGTT TTTAAAGATA GTTTCAACAC CGGGTTTCTT TAAGGAAGAG
CAAAAATATC TAAAACCAAA GAATATTTTT GAAACGTTTG AATTAGCAAT TTTAAGATGT
AATTCTGCTG CAATAACTAT TTGGAAGGCA TTTGGTAGGT TGTTTTTGGG TGAGGGTGTG
AATCAAGTGG CAGGACCTGT GGGAATTGCT GTGATAGTTG GTGAAGCAGC AAGGGCTGGT
TGGGAAACTA TTTTAACCGT AGTAGCTTTA TTTACATTGA ATTTGGGGAT TTTTAATTTG
TTACCTTTAC CAGCTCTTGA TGGTGGAAGG ATAGTGTTTT CGTTAATTGA AATTATTTCA
GGTAAAAAAG TGAATAGAAG GATAGAAGCT ATAGTCCATA CAATAGGATT TTTCATACTT
ATGGCTCTTG CGTTTTATTT TATGTTTGCA GATTTTACTA GATTTTTCTG A
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| Protein sequence | MEVNSIISFI SFILVFMFVV VVHEFGHFLF AKIFKVTVLE FSIGFGPAIF KKQFKETLFK
INVIPFGGYV RLKGEDFNEE EEDGLYAKPA WQRLLIAFAG PLFSILAAYI LFVPIVNNWG
VPAVTIGRVI ENSPAFEYGL KEGDVILKVN GKRVFDSIEV SNEIKKGNVV KLTILRDDKI
LEKTIPPRIS PPEYVFILDD VRGKIYGKIK KINGYKLGVD LDVKKEDFVE IEDEFGNVLS
GVVLSFTFVD ERPTIGFYYA GFKPVANKNI EPFLSNDRIV KVNDMEIEDY VSLISLISRL
SLKEKQVYID IWGDEIKEKL NPLSERLEIV VQRNGEKMTI DLDKEEFLKI VSTPGFFKEE
QKYLKPKNIF ETFELAILRC NSAAITIWKA FGRLFLGEGV NQVAGPVGIA VIVGEAARAG
WETILTVVAL FTLNLGIFNL LPLPALDGGR IVFSLIEIIS GKKVNRRIEA IVHTIGFFIL
MALAFYFMFA DFTRFF
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