Gene Tmel_0156 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_0156 
Symbol 
ID5297008 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand- 
Start bp167072 
End bp167575 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content31% 
IMG OID640768413 
Productiron dependent repressor 
Protein accessionYP_001305418 
Protein GI150020064 
COG category[K] Transcription 
COG ID[COG1321] Mn-dependent transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.179835 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGTTA AAAAGCTAAC TCCTACACTT GAGAATTACC TTGTAACAAT TTATAAATTA 
TCAAAGAAAA ATGGTTTTAC AAGGATTTCC GAAGTTGCTA ATTTTAAAAA AGTTAGTTAT 
CCTAGTGTTA CAACTGCCGT GAGAAAATTA ACGAAGTTAG GTTATGTTGA ACATGAAAGG 
TATGGGTTTA TAAAACTTAC AAATAAAGGA AGAAGGATTG CGATTACCAT TCACAACGGA 
GAATTGAGGG TTAAGTATTT CTTTATGTAT GTAATAGGTT TTCCAGAAAG CAGAGCACAA 
CAAGTTGCTA AGCTTATGAT ATATGGTTTA GATAATGAAA CAAGAAAACA ATTAAGACGT 
TTTTATGCGT TGATGATTGA TTTTGATGAA TCAAAGGCAA AAAAACTTGT AGAATTTTTA 
AAAGAACAAA GGAAAAAATT GGGAGTAAAA GAGGTACCAA AAGAAGCGTT GAAATTGAAA 
TTGAGGTTAA AGGAGGATAA CTGA
 
Protein sequence
MTVKKLTPTL ENYLVTIYKL SKKNGFTRIS EVANFKKVSY PSVTTAVRKL TKLGYVEHER 
YGFIKLTNKG RRIAITIHNG ELRVKYFFMY VIGFPESRAQ QVAKLMIYGL DNETRKQLRR 
FYALMIDFDE SKAKKLVEFL KEQRKKLGVK EVPKEALKLK LRLKEDN