| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0146 |
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| Symbol | |
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| ID | 5297087 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | - |
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| Start bp | 156237 |
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| End bp | 157946 |
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| Gene Length | 1710 bp |
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| Protein Length | 569 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 640768403 |
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| Product | M3 family oligoendopeptidase |
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| Protein accession | YP_001305408 |
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| Protein GI | 150020054 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1164] Oligoendopeptidase F |
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| TIGRFAM ID | [TIGR02289] oligoendopeptidase, M3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00338849 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATATTTA CCAATAAGAA AATAGAAAAG AGAGAAAGAA AGTATTTTAA AGATTTATCT
TCAACAGATG CTGAAAAAAT TATAGAAGTT TTAAATTCTT TATTAGAAAA ACAGATTACT
AAAGAAGAAG ATGTAGTTGA ATTAGTTGAA AAATTAACAG AACTTTCGGA TATTGTTGCA
GAAGAAATGG GTTGGAGATA TATTAATATG ACTAGGTTTG CCGATAAAAA GGAATATGCT
GAAAAATTCA ACGAATACTT TCAAAATGTA GTTTCAGAGT TAAAACCGTA TTACATAAAG
CTTGAGAAAA AGATTTACGA TAGCGATGTA AAGATTTCTA AAGAATATGT TCATATGTTG
AATATAATTT CTAATAATAT TGAATTATTT AGAGAGGAAA ATATTCCTCT ACAGGTTGAA
GAAAGGAAAC TTTCAAACAA GTATGGAGCT ATATTTGGCT CTATTGAAGT TGAGTTTAGG
GGTGAAAAGA AAACCCTACA ACAGTTATTA CCGTATCTGA AATCACCTGA TAGAGAAATT
AGGGAGGAAG CTTGGAGAAA GAGATTTCAT GGATTGTTGG AAAAACGTGA AGAGCTTGAT
AAATTGTTCG ATGAGTTGAA AGAGATAAGA ATAAAACAGG CCAGAAATGC TGGATTTGAT
AATTATAGAG ATTACATGCA TAAATTGAAA GGAAGATTTG AATATACGGT TGATGATGTA
TACAAGTTCC ATGAAGCAGT TGAAAAGAAA GTAATGCCAT TTTTCAAAAA AAGGATGGAA
AAGAGGGCAA AGAAGTTAGG ATTAGAGGTT TTAAAGCCGT GGGATACAGC GGTTGACGTC
GATGGGAAAG TATTAAATCC TTACCAAACA GTTGATGAGT TTGTAGATAA AGCAATAAAG
ATTTTAGGAA AGGTAAAACC TCTTTTTGGA GAAAGATTGG AGATGATGAA AAATTCAGGA
TTGCTTGATC TTGAAAACAG AAAAGGGAAG GCGCCTGGTG GGTATAATTA TCCATTGCCA
GAAACGGGTG CACCGTTTAT TTTCATGAAT GCTACTGGTC AAAGTGGAGA TGTGAGAACG
TTGTTACATG AATCAGGTCA TGCAATGCAT ACTTTTGAAA CTGTAAACAT CCCAATAACC
TATTACAGAC CAAATAGAAT GGAAATAGCA GAGTTAGCTT CTATGAGTAT GGAGCTTTTA
ACTATGCATT ACTGGAGTGA ATATTACAAA GATGAGGAAG AATACAAAAA AGCGATGATT
GAAGAATTAG AACATGCAGT ACTATTTTTA CCTTGGTGCA TGACTGTTGA TGCTTTCCAA
CAATGGATAT ATACGAATGA CCATACACCA GAAGAACGCG CACAGTACTT TGGGAAACTT
ATGGATAAAT TTAACCAGGG TGTTGATTGG TCTGGACTTG AACTTGAGAA ACAATATAGA
TGGTTATTCC AGTTACATAT TTTTGAAGTG CCATTTTATT ATATTGAATA TGGAATTGCA
CAACTTGGAG CGTTATCTAT TTATAAAAAC TACATTGAAA ATCCAGAAAA GACAATAGAA
AACTATCACA ACTTTTTAAA GGTTGGATAT AAAGTGCCGA TAGATAAAGT ATATGAAGTT
GCGGGGATAA AATTAGATTT TTCCGAGGAA CATATCGAAG AGATTGTAAA TTTTGTAGAA
GAACGGTTAA GATTATTGGA GGGAGAGTAG
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| Protein sequence | MIFTNKKIEK RERKYFKDLS STDAEKIIEV LNSLLEKQIT KEEDVVELVE KLTELSDIVA
EEMGWRYINM TRFADKKEYA EKFNEYFQNV VSELKPYYIK LEKKIYDSDV KISKEYVHML
NIISNNIELF REENIPLQVE ERKLSNKYGA IFGSIEVEFR GEKKTLQQLL PYLKSPDREI
REEAWRKRFH GLLEKREELD KLFDELKEIR IKQARNAGFD NYRDYMHKLK GRFEYTVDDV
YKFHEAVEKK VMPFFKKRME KRAKKLGLEV LKPWDTAVDV DGKVLNPYQT VDEFVDKAIK
ILGKVKPLFG ERLEMMKNSG LLDLENRKGK APGGYNYPLP ETGAPFIFMN ATGQSGDVRT
LLHESGHAMH TFETVNIPIT YYRPNRMEIA ELASMSMELL TMHYWSEYYK DEEEYKKAMI
EELEHAVLFL PWCMTVDAFQ QWIYTNDHTP EERAQYFGKL MDKFNQGVDW SGLELEKQYR
WLFQLHIFEV PFYYIEYGIA QLGALSIYKN YIENPEKTIE NYHNFLKVGY KVPIDKVYEV
AGIKLDFSEE HIEEIVNFVE ERLRLLEGE
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