| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0087 |
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| Symbol | |
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| ID | 5297086 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | - |
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| Start bp | 92325 |
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| End bp | 93446 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 640768338 |
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| Product | chaperone protein DnaJ |
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| Protein accession | YP_001305349 |
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| Protein GI | 150019995 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
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| TIGRFAM ID | [TIGR02349] chaperone protein DnaJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.60044 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGGCAAAAA AAGATTATTA TGAAATCCTT GGTGTTTCAA GAAATGCCAC ACAAGAGGAA
ATTCGACAAG CGTATAAGAA GCTTATAAAA AAATGGCATC CCGACAGAAA TTATGAAAAT
AAAAAGCTTG CAGAAGAAAA ATTTAAAGAA ATTCAAGAAG CATATGAAGT ATTATCTGAT
CCTGAGAAAA GGGCGATGTA CGATAAATTT GGGTATGTAG GTGATGTTCC ACCAAATGCC
GGCGGAGGAT TTAGAGGATT TGGAGGTTTT GAAGATATAT TTAAAGATTT TGGGGATTTT
ATTAACAACG ATATTTTTAA TATATTTTTT GGTGATCAAA GGACCTCTTC AAGAAAAAGA
ACAAAAACTC CCAGAAAAGG AGAGGATATA AATATCTCCG TTGATGTGTC TTTTGAAGAA
TTATTTACTG GGGTAAAAAT TCCACTTGAA TATGATAGAT ACGAAGTTTG TGAGCATTGT
CATGGGGAGG GCGTAGAACC TGGAAGTGGA TGGGTAACTT GTCCGAAATG TCATGGTACA
GGAACAGTTA GAGAAGAGAG AAGGACATTT TTAGGTGTAA TTGTAAACCA ATATACATGT
AATCAATGTG GTGGGACTGG TAAAATTCCT GGAGAGAGTT GTCGTGTATG TGGGGGTACT
GGTAGAATAA GAAAAAGACA TAGAATAGAA GTGAATATAC CAGCAGGTGT GGAGAATGGT
ACTATTTTGA GAATTCAAGG TGGAGGTCAT GCAGGATATT ATGGTGGAGG ATATGGAGAT
TTGTATGTAC ATGTTAGGGT AGTAGGATAC ACAAGTTTTG AAAGAAAAGG CAATAACTTG
ATAAAAGATT TAAAGATAGA TTATGTTGAT GCAATTTTGG GAACAAAGGT TAAAATAAAG
ATGCCAGATG GTAAAATAAA AGAGGTAAAG ATTCCATCCG GTGTACAACA TGGACAAGAA
ATATATGTAT ATGGTGAGGG GATACCTGAT ATGAGAACTG GAAGAAGGGG AGATTTGATT
TTAAGGATTA ATGTTGGGAT TCCTACTAAA GTTTCAAGAA CTGAGAAAAA ATTATTAAAA
GAAATAGCGA AACTGAGGGG AAAGGATGTT AGAGAAGATT GA
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| Protein sequence | MAKKDYYEIL GVSRNATQEE IRQAYKKLIK KWHPDRNYEN KKLAEEKFKE IQEAYEVLSD
PEKRAMYDKF GYVGDVPPNA GGGFRGFGGF EDIFKDFGDF INNDIFNIFF GDQRTSSRKR
TKTPRKGEDI NISVDVSFEE LFTGVKIPLE YDRYEVCEHC HGEGVEPGSG WVTCPKCHGT
GTVREERRTF LGVIVNQYTC NQCGGTGKIP GESCRVCGGT GRIRKRHRIE VNIPAGVENG
TILRIQGGGH AGYYGGGYGD LYVHVRVVGY TSFERKGNNL IKDLKIDYVD AILGTKVKIK
MPDGKIKEVK IPSGVQHGQE IYVYGEGIPD MRTGRRGDLI LRINVGIPTK VSRTEKKLLK
EIAKLRGKDV RED
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