Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmel_0038 |
Symbol | |
ID | 5297052 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermosipho melanesiensis BI429 |
Kingdom | Bacteria |
Replicon accession | NC_009616 |
Strand | + |
Start bp | 41784 |
End bp | 42665 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 640768288 |
Product | periplasmic binding protein |
Protein accession | YP_001305302 |
Protein GI | 150019948 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000608499 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAT TTTTAACCGT TGTTATTACA ATTTTGAGTA TTTTGGCCTT TTCTATTTCC ATTGTCGATG ACGCCGGAAG ATTGGTAACT TTTGATAAAG TACCAAAACG TATAGTATCT GCTGCGCCAA GTTCTACAAA ATTTTTATTG AAACTTGGTT TGGATGAAAA AATTGTAGGA GTTACCGATT GGGATGTATT TAACGCGGAA AAAATTGGTA ACATGGTACC GTTAAATATC GAAAAAATAC TTTCGTTAAA TCCAGATGTA GTAATAACGT TTGGAGGATT CCAATTACCA GAAGTTGAAA AATTGGAGAA ATTTGGTATC AAAGCTTTTG TTATCAACCC TGTTACCTTA AATGACATAG CAAGAGATAT AATGTTACTT GGAAATATTT TCAAAAAAAC TGAATTAGCT AAAAAAGTAA AAGATGAAAT TTTATCAAAA ATGAAAGATT ACGGCACAAA GACAGCAAAA ATTCCACTTT CAAAAAGACC AAAAGTATTT TTCACCATAA CAATCCCAAA TGAGGAAACA AAAGACCTAT GGACTGCCGG AACGGGATCG TATATAAATG AATTGATAAC AATCGCAGGA GGAGTTAATA TCTGTGCCCC ATATACGGGA AACAACGGAT GGTTTTCCGT TAATTGGGAA TTTCTAACAA TTAACGACCC AGATGTAATA ATAGTTTCTG GATATGGTAA TCCAGAAAAA ATAAAAGAAA ATATAAAATC TAACAAACTA TTTTCTTCTT TAAAAGCTGT TAAAAATGAC AGAATTCTTA TTGTCAATGG AAACGATATT AGCTCTATCT CCCCTGATAT TATAAAATAT CTGGATATTT TTTATAATTT TTTTTATGGA GGAAATAAAT GA
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Protein sequence | MKKFLTVVIT ILSILAFSIS IVDDAGRLVT FDKVPKRIVS AAPSSTKFLL KLGLDEKIVG VTDWDVFNAE KIGNMVPLNI EKILSLNPDV VITFGGFQLP EVEKLEKFGI KAFVINPVTL NDIARDIMLL GNIFKKTELA KKVKDEILSK MKDYGTKTAK IPLSKRPKVF FTITIPNEET KDLWTAGTGS YINELITIAG GVNICAPYTG NNGWFSVNWE FLTINDPDVI IVSGYGNPEK IKENIKSNKL FSSLKAVKND RILIVNGNDI SSISPDIIKY LDIFYNFFYG GNK
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